Table 2 |
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|
cis-Decoder libraries |
|||
| cis-Decoder tag libraries |
cDTs |
Enhancers |
CSBs/Total bp |
|
|
|||
| Mammalian/vertebrate |
|||
| Neural specific |
336 |
14 |
286/4,162 |
| Mesodermal specific |
258 |
21 |
289/3,749 |
| Common |
137 |
35 |
575/7,911 |
| Neural enriched* |
60 |
35 |
575/7,911 |
| Mesodermal enriched* |
55 |
35 |
575/7,911 |
| Drosophila |
|||
| Neural specific |
444 |
36 |
601/8,002 |
| Segmental specific |
284 |
38 |
513/6,608 |
| Mesodermal specific |
169 |
25 |
398/5,469 |
| Neural and segmental |
451 |
75 |
1,114/14,610 |
| Neural/segmental enriched* |
277 |
100 |
1,511/20,085 |
| Mesodermal enriched* |
104 |
63 |
1,511/20,085 |
| Common |
993 |
100 |
1,511/20,085 |
| Drosophila/mammalian/vertebrate |
|||
| Neural specific |
873 |
50 |
887/12,164 |
| Mesodermal specific |
445 |
46 |
687/9,218 |
|
|
|||
|
* cDTs have a ≥75% correspondence to a specific library but are also present at a low frequency in unrelated enhancers. |
|||
|
Brody et al. Genome Biology 2007 8:R75 doi:10.1186/gb-2007-8-5-r75 |
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