Genome Biology

official impact factor 6.89

Open Access Research

Genome-wide identification of novel expression signatures reveal distinct patterns and prevalence of binding motifs for p53, nuclear factor-κB and other signal transcription factors in head and neck squamous cell carcinoma

Bin Yan1, Xinping Yang1, Tin-Lap Lee2, Jay Friedman1, Jun Tang3, Carter Van Waes1 and Zhong Chen1*

Author Affiliations

1 Head and Neck Surgery Branch, National Institute on Deafness and Other Communication Disorders, National Institutes of Health, Center Drive, Bethesda, Maryland 20892, USA

2 Laboratory of Clinical Genomics, National Institute of Child Health and Human Development, National Institutes of Health, Convent Drive, Bethesda, MD 20892, USA

3 Department of Preventive Medicine, University of Tennessee, Health Science Center, N Pauline St., Memphis, TN 38163, USA

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Genome Biology 2007, 8:R78 doi:10.1186/gb-2007-8-5-r78

Published: 11 May 2007

Additional files

Additional data file 1:

Shown is a list of genes in cluster C (over-expressed in UM-SCC cells).

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Open Data

Additional data file 2:

Included are GO annotations of genes in clusters A to C (over-expressed in UM-SCC cells) and of genes in clusters D to F (under-expressed in UM-SCC cells).

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Open Data

Additional data file 3:

Provided are sequences, location, and matrix similarity of putative TFBSs in genes in clusters A and B (over-expressed in UM-SCC cells).

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Open Data