Genome Biology

official impact factor 6.89

Open Access Software

Tilescope: online analysis pipeline for high-density tiling microarray data

Zhengdong D Zhang1, Joel Rozowsky1, Hugo YK Lam2, Jiang Du3, Michael Snyder4 and Mark Gerstein3,1,2*

Author Affiliations

1 Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520, USA

2 Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT 06520, USA

3 Department of Computer Science, Yale University, New Haven, CT 06520, USA

4 Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520, USA

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Genome Biology 2007, 8:R81 doi:10.1186/gb-2007-8-5-r81

Published: 14 May 2007

Additional files

Additional data file 1:

Supplementary material: a 'Data format optimization and standardization' section; a 'Technical details of the optimization algorithm' section; supplementary Table 1, 'The meaning of columns of various tab-delimited input data file formats'; supplementary Table 2, 'Attributes of the element tag defined in the configuration file'; and supplementary Table 3, 'File size reduction by Zip and our optimization algorithm'.

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