Table 1

TFBSs associated with differential up-regulation of E2F target genes

Identifier

P value

Q-value

Factor name

Reference

V.E2F_Q6

0.000

0.000

E2F

[25-27]

V.E2F1_Q3

0.000

0.000

E2F-1

[22,25-27]

V.E2F1_Q6

0.000

0.000

E2F-1

[22,25-27]

V.E2F1DP1_01

0.000

0.000

E2F-1:DP-1

[25-27]

V.E2F4DP1_01

0.000

0.000

E2F-4:DP-1

[61]

V.E2F1DP1RB_01

0.000

0.000

E2F-1:DP-1

[25-27]

V.CHCH_01

0.000

0.000

ChCh

V.E2F4DP2_01

0.000

0.019

E2F-4:DP-2

[61]

V.E2F_03

0.001

0.029

E2F

[25-27]

V.E2F_Q2

0.001

0.029

E2F

[25-27]

V.AP2ALPHA_02

0.001

0.036

AP-2alpha

[28,29]

V.MYCMAX_B

0.002

0.049

Myc/max

[62]

V.ZF5_B

0.002

0.049

ZF5

[22]

V.E2F1DP2_01

0.002

0.049

E2F-1:DP-2

[22,25-27]

V.AP2GAMMA_01

0.003

0.052

AP-2gamma

[28,29]

V.CETS1P54_01

0.004

0.060

c-Ets-1

[35]

V.AP2ALPHA_01

0.005

0.075

AP-2alpha

[28,29]

V.SRF_Q4

0.005

0.075

SRF

V.GLI_Q2

0.006

0.078

GLI

V.E2F_Q3

0.007

0.087

E2F

[22,25-27]

V.SRF_Q5_01

0.009

0.098

SRF

V.PAX4_01

0.009

0.100

Pax-4a

V.FOXO4_02

0.011

0.103

FOXO4

[63]

V.AFP1_Q6

0.011

0.103

AFP1

V.EGR2_01

0.012

0.104

EGR-2

V.ZF5_01

0.012

0.106

ZF5

[22]

V.SPZ1_01

0.013

0.106

Spz1

V.SP1_01

0.023

0.143

Sp1

[30-34]

V.ELK1_02

0.026

0.143

Elk-1

V.E2_Q6

0.026

0.143

E2

V.GC_01

0.028

0.143

GC box

V.WHN_B

0.023

0.143

Whn

[22]

V.ETF_Q6

0.028

0.143

ETF

[64]

V.EBF_Q6

0.030

0.144

EBF

V.SP1_Q4_01

0.032

0.145

Sp1

[30-34]

Transcription factors for which common TFBS associations are found in the promoters of down-regulated p53 target genes are indicated in bold. Results are sorted by Q-value.

De Bleser et al. Genome Biology 2007 8:R83   doi:10.1186/gb-2007-8-5-r83