Table 2

TFBSs associated with differential down-regulation of E2F target genes

Identifier

P value

Q-value

Factor name

Reference


V.CEBPB_01

0.000

0.000

C/EBP

[39]

V.CEBP_C

0.000

0.010

C/EBP

[39]

V.CDPCR3_01

0.001

0.026

CDP CR3

V.AP3_Q6

0.002

0.043

AP3

V.STAT4_01

0.003

0.049

STAT4

V.SMAD4_Q6

0.003

0.049

SMAD-4

[65]

V.AREB6_04

0.005

0.075

AREB6

V.CEBPA_01

0.006

0.078

C/EBP

[39]

V.GEN_INI3_B

0.009

0.102

GEN_INI

V.PADS_C

0.011

0.103

PADS

V.GEN_INI2_B

0.011

0.103

GEN_INI

V.GEN_INI_B

0.011

0.103

GEN_INI

V.PAX2_02

0.013

0.106

PAX2

V.LDSPOLYA_B

0.015

0.110

Poly A

V.IRF_Q6

0.018

0.130

IRF

[36]

V.CEBP_Q2

0.020

0.137

C/EBP

[39]

V.CEBP_01

0.029

0.143

C/EBP

[39]

V.AP1FJ_Q2

0.027

0.143

AP-1

[66]

V.ETS1_B

0.029

0.143

c-Ets-1

[67]

V.DBP_Q6

0.027

0.143

DBP

V.FOXM1_01

0.027

0.143

FOXM1

[68]

V.CEBP_Q3

0.028

0.143

C/EBP

[39]

V.HELIOSA_02

0.024

0.143

HELIOS

V.PIT1_Q6

0.030

0.144

Pit-1

V.AP1_01

0.033

0.146

AP-1

[66]

V.BARBIE_01

0.035

0.150

Barbie box

V.STAT6_01

0.035

0.150

STAT6

[38]

V.AP1_Q2

0.036

0.151

AP-1

[66]


Transcription factors for which common TFBS associations are found in the promoters of up-regulated p53 target genes are indicated in bold. Results are sorted by Q-value.

De Bleser et al. Genome Biology 2007 8:R83   doi:10.1186/gb-2007-8-5-r83

Open Data