Table 3

Orthology and synteny with Anopheles gambiae and Drosophila melanogaster

Aedes aegypti

Anopheles gambiae

Drosophila melanogaster


BAC number

Transcript number

Aedes transcripts

Ortholog

E-value

Chromosome

Syntenic block

Ortholog

E-value

Syntenic block


1

1

AAEL013103

ENSANGG00000021076

3.8E-133

3R-37D

Yes

CG31938

9.5E-094

--

2

AAEL013088

ENSANGG00000026626

5.5E-009

3R-37D

Yes

-

-

-

3

AAEL013092

ENSANGG00000011837

0.0E+0.0

3R-37D

Yes

CG10413

0.0E+0.0

-

4

AAEL013582

ENSANGG00000023798

1.1E-035

3R-37D

Yes

CG11247

1.1E-128

-

5

AAEL015006

ENSANGG00000011941

1E-106

3R-37D

Yes

CG3661

2.2E-104

-

6

AAEL013098

ENSANGG00000002369

0.0E+0.0

3R-37D

Yes

CG7961

0.0E+0.0

-

3

7

AAEL009524

ENSANGG00000015193

7.3E-281

2R-10C

NA

CG8696

7.2E-226

NA

4

8

AAEL008104

1 to many

9.4E-058

GW

-

1 to many

8.7E-040

-

9

AAEL008110

ENSANGG00000011807

3E-154

2R-12B

Yes

CG4832

2.5E-078

-

10

AAEL008114

ENSANGG00000009472

4.4E-037

GW

-

CG12752

1.6E-026

-

11

AAEL008115

ENSANGG00000011761

2.2E-108

2R-12B

Yes

CG11025

3.2E-037

-

12

AAEL008103

ENSANGG0000012462

7.90E-061

2R-12B

-

CG7808

2.8E-073

-

13

AAEL008100

ENSANGG00000009215

1.4E-053

2R-8B

-

CG1078

3E-040

-

5

14

AAEL014561

ENSANGG00000022738

3.0E-009

3R-32C

-

-

-

-

15

AAEL014559

ENSANGG00000010922/ENSANGG00000022179

3.3E-068

3R-35C

-

-

-

-

6

16

AAEL014711

ENSANGG00000005482

0.0E+0.0

3R-29B

Yes

CG8815

0.0E+0.0

-

17

AAEL014712

ENSANGG00000022484

8.9E-199

3R-29B

Yes

CG15084

8.3E-170

-

18

AAEL014709

ENSANGG00000007515

0.0E+0.0

3R-29B

Yes

CG15100

0.0E+0.0

-

7

19

AAEL006423

ENSANGG00000020489

1.1E-006

2L-20C

-

CG40120

6.1E-006

-

20

No transcript

ENSANGG00000011708

3.5E-026

GW

-

CG33803

6.9E-028

-

21

AAEL006424

ENSANGG00000027449

3.0E-062

3R-30C

Yes

-

-

-

22

AAEL006417

ENSANGG00000020969

2.6E-056

3R-30C

Yes

-

-

-

8

23

AAEL006019

ENSANGG00000025048

8.0E-073

2L-20C

NA

CG9907

8.9E-174

NA

9

24

AAEL010573

ENSANGG00000015129

3.6E-060

2R-19B

Yes

CG6684

2E-050

-

25

AAEL010594

ENSANGG00000014580

3.7E-107

2R-19B

Yes

CG32418

2E-032

-

26

AAEL010587

ENSANGG00000014498

2E-192

2R-19B

Yes

CG9590

1E-083

-

27

AAEL010575

ENSANGG00000014455

2E-192

2R-19B

Yes

CG11837

3.6E-196

-

28

AAEL000054

ENSANGG00000002208

0.0E+0.0

2R-12E

-

CG8651

0.0E+0.0

-

29

AAEL010595

ENSANGG00000010690

0.0E+0.0

2L-26A

-

CG16982

1.7E-240

-

10

30

AAEL007897

ENSANGG0000016631

5.1E-194

3R-29B

Yes

CG14928

6E-164

-

31

AAEL007893

ENSANGG00000018850

1.3E-175

2R-12C

-

CG31548

2.3E-137

-

32

AAEL007907

ENSANGG00000015978

1.7E-200

3R-29B

Yes

CG4629

1.3E-144

-

11

33

AAEL002503

ENSANGG00000015084

3.8E-092

X-1B

Yes

CG1989

3E-082

Yes

34

AAEL002532

ENSANGG00000015036

4.4E-250

X-1B

Yes

CG3707

6.3E-285

-

35

AAEL002534

ENSANGG00000012432

6.5E-186

X-5C

-

CG17521

1.9E-167

Yes

36

AAEL002523

ENSANGG00000015081

7.3E-065

X-1B

Yes

CG1660

6.8E-051

-

12

37

AAEL001205

ENSANGP00000016497

0.0E+0.0

3R-33B

-

CG4244

0.0E+0.0

-

38

AAEL001215

SNAP_00000004435

9.9E-123

3R-33B

Yes

CG4230

2E-055

-

39

AAEL001215

ENSANGP00000023803

0.0E+0.0

3R-33B

Yes

CG7269

1.2E-299

-

40

AAEL001198

ENSANGP00000023805

0.0E+0.0

3R-29B

-

CG8451

4E-236

-

41

AAEL001201

ENSANGP00000016633

9.8E-041

3R-33B

Yes

-

-

-

42

AAEL001210

ENSANGP00000016606

1.9E-060

3R-33B

Yes

CG8680

2.3E-052

-

13

43

AAEL008780

ENSANGP00000021694

1.9E-079

2L-21C

Yes

CG2071/CG1304

3.1E-058

-

44

AAEL008781

ENSANGP00000021694

4.6E-071

2L-21C

Yes

CG2071/CG1304

3.5E-048

-

45

AAEL008769

ENSANGP00000021694

1.9E-088

2L-21C

Yes

CG2071/CG1304

1.1E-064

-

46

AAEL008778

ENSANGP00000021867

1.6E-103

2L-21C

Yes

-

-

-

14

47

AAEL005065

ENSANGP00000018910

6E-159

2R-16C

Yes

CG6746

3.7E-134

-

48

AAEL005085

ENSANGP00000018909

6.3E-084

2R-16C

Yes

CG10652

2.5E-078

-

49

AEL005237

ENSANGP00000018845

4.9E-130

2R-16C

Yes

CG1298

2.4E-095

-

50

AAEL005229

ENSANGP00000019493

3.7E-122

2R-16C

Yes

CG6746

8.3E-090

-

51

AAEL005218

ENSANGG00000016433

7.7E-151

2R-16B

Yes

CG10624

1.9E-121

-


Orthology was determined for each transcript from all 14 BACs. The presence of synteny was also determined for orthologous blocks of transcripts when more than one transcript was present on the BAC clone.

Lobo et al. Genome Biology 2007 8:R88   doi:10.1186/gb-2007-8-5-r88

Open Data