Table 3 |
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|
Orthology and synteny with Anopheles gambiae and Drosophila melanogaster |
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| Aedes aegypti |
Anopheles gambiae |
Drosophila melanogaster |
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|
|
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| BAC number |
Transcript number |
Aedes transcripts |
Ortholog |
E-value |
Chromosome |
Syntenic block |
Ortholog |
E-value |
Syntenic block |
|
|
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| 1 |
1 |
AAEL013103 |
ENSANGG00000021076 |
3.8E-133 |
3R-37D |
Yes |
CG31938 |
9.5E-094 |
-- |
| 2 |
AAEL013088 |
ENSANGG00000026626 |
5.5E-009 |
3R-37D |
Yes |
- |
- |
- |
|
| 3 |
AAEL013092 |
ENSANGG00000011837 |
0.0E+0.0 |
3R-37D |
Yes |
CG10413 |
0.0E+0.0 |
- |
|
| 4 |
AAEL013582 |
ENSANGG00000023798 |
1.1E-035 |
3R-37D |
Yes |
CG11247 |
1.1E-128 |
- |
|
| 5 |
AAEL015006 |
ENSANGG00000011941 |
1E-106 |
3R-37D |
Yes |
CG3661 |
2.2E-104 |
- |
|
| 6 |
AAEL013098 |
ENSANGG00000002369 |
0.0E+0.0 |
3R-37D |
Yes |
CG7961 |
0.0E+0.0 |
- |
|
| 3 |
7 |
AAEL009524 |
ENSANGG00000015193 |
7.3E-281 |
2R-10C |
NA |
CG8696 |
7.2E-226 |
NA |
| 4 |
8 |
AAEL008104 |
1 to many |
9.4E-058 |
GW |
- |
1 to many |
8.7E-040 |
- |
| 9 |
AAEL008110 |
ENSANGG00000011807 |
3E-154 |
2R-12B |
Yes |
CG4832 |
2.5E-078 |
- |
|
| 10 |
AAEL008114 |
ENSANGG00000009472 |
4.4E-037 |
GW |
- |
CG12752 |
1.6E-026 |
- |
|
| 11 |
AAEL008115 |
ENSANGG00000011761 |
2.2E-108 |
2R-12B |
Yes |
CG11025 |
3.2E-037 |
- |
|
| 12 |
AAEL008103 |
ENSANGG0000012462 |
7.90E-061 |
2R-12B |
- |
CG7808 |
2.8E-073 |
- |
|
| 13 |
AAEL008100 |
ENSANGG00000009215 |
1.4E-053 |
2R-8B |
- |
CG1078 |
3E-040 |
- |
|
| 5 |
14 |
AAEL014561 |
ENSANGG00000022738 |
3.0E-009 |
3R-32C |
- |
- |
- |
- |
| 15 |
AAEL014559 |
ENSANGG00000010922/ENSANGG00000022179 |
3.3E-068 |
3R-35C |
- |
- |
- |
- |
|
| 6 |
16 |
AAEL014711 |
ENSANGG00000005482 |
0.0E+0.0 |
3R-29B |
Yes |
CG8815 |
0.0E+0.0 |
- |
| 17 |
AAEL014712 |
ENSANGG00000022484 |
8.9E-199 |
3R-29B |
Yes |
CG15084 |
8.3E-170 |
- |
|
| 18 |
AAEL014709 |
ENSANGG00000007515 |
0.0E+0.0 |
3R-29B |
Yes |
CG15100 |
0.0E+0.0 |
- |
|
| 7 |
19 |
AAEL006423 |
ENSANGG00000020489 |
1.1E-006 |
2L-20C |
- |
CG40120 |
6.1E-006 |
- |
| 20 |
No transcript |
ENSANGG00000011708 |
3.5E-026 |
GW |
- |
CG33803 |
6.9E-028 |
- |
|
| 21 |
AAEL006424 |
ENSANGG00000027449 |
3.0E-062 |
3R-30C |
Yes |
- |
- |
- |
|
| 22 |
AAEL006417 |
ENSANGG00000020969 |
2.6E-056 |
3R-30C |
Yes |
- |
- |
- |
|
| 8 |
23 |
AAEL006019 |
ENSANGG00000025048 |
8.0E-073 |
2L-20C |
NA |
CG9907 |
8.9E-174 |
NA |
| 9 |
24 |
AAEL010573 |
ENSANGG00000015129 |
3.6E-060 |
2R-19B |
Yes |
CG6684 |
2E-050 |
- |
| 25 |
AAEL010594 |
ENSANGG00000014580 |
3.7E-107 |
2R-19B |
Yes |
CG32418 |
2E-032 |
- |
|
| 26 |
AAEL010587 |
ENSANGG00000014498 |
2E-192 |
2R-19B |
Yes |
CG9590 |
1E-083 |
- |
|
| 27 |
AAEL010575 |
ENSANGG00000014455 |
2E-192 |
2R-19B |
Yes |
CG11837 |
3.6E-196 |
- |
|
| 28 |
AAEL000054 |
ENSANGG00000002208 |
0.0E+0.0 |
2R-12E |
- |
CG8651 |
0.0E+0.0 |
- |
|
| 29 |
AAEL010595 |
ENSANGG00000010690 |
0.0E+0.0 |
2L-26A |
- |
CG16982 |
1.7E-240 |
- |
|
| 10 |
30 |
AAEL007897 |
ENSANGG0000016631 |
5.1E-194 |
3R-29B |
Yes |
CG14928 |
6E-164 |
- |
| 31 |
AAEL007893 |
ENSANGG00000018850 |
1.3E-175 |
2R-12C |
- |
CG31548 |
2.3E-137 |
- |
|
| 32 |
AAEL007907 |
ENSANGG00000015978 |
1.7E-200 |
3R-29B |
Yes |
CG4629 |
1.3E-144 |
- |
|
| 11 |
33 |
AAEL002503 |
ENSANGG00000015084 |
3.8E-092 |
X-1B |
Yes |
CG1989 |
3E-082 |
Yes |
| 34 |
AAEL002532 |
ENSANGG00000015036 |
4.4E-250 |
X-1B |
Yes |
CG3707 |
6.3E-285 |
- |
|
| 35 |
AAEL002534 |
ENSANGG00000012432 |
6.5E-186 |
X-5C |
- |
CG17521 |
1.9E-167 |
Yes |
|
| 36 |
AAEL002523 |
ENSANGG00000015081 |
7.3E-065 |
X-1B |
Yes |
CG1660 |
6.8E-051 |
- |
|
| 12 |
37 |
AAEL001205 |
ENSANGP00000016497 |
0.0E+0.0 |
3R-33B |
- |
CG4244 |
0.0E+0.0 |
- |
| 38 |
AAEL001215 |
SNAP_00000004435 |
9.9E-123 |
3R-33B |
Yes |
CG4230 |
2E-055 |
- |
|
| 39 |
AAEL001215 |
ENSANGP00000023803 |
0.0E+0.0 |
3R-33B |
Yes |
CG7269 |
1.2E-299 |
- |
|
| 40 |
AAEL001198 |
ENSANGP00000023805 |
0.0E+0.0 |
3R-29B |
- |
CG8451 |
4E-236 |
- |
|
| 41 |
AAEL001201 |
ENSANGP00000016633 |
9.8E-041 |
3R-33B |
Yes |
- |
- |
- |
|
| 42 |
AAEL001210 |
ENSANGP00000016606 |
1.9E-060 |
3R-33B |
Yes |
CG8680 |
2.3E-052 |
- |
|
| 13 |
43 |
AAEL008780 |
ENSANGP00000021694 |
1.9E-079 |
2L-21C |
Yes |
CG2071/CG1304 |
3.1E-058 |
- |
| 44 |
AAEL008781 |
ENSANGP00000021694 |
4.6E-071 |
2L-21C |
Yes |
CG2071/CG1304 |
3.5E-048 |
- |
|
| 45 |
AAEL008769 |
ENSANGP00000021694 |
1.9E-088 |
2L-21C |
Yes |
CG2071/CG1304 |
1.1E-064 |
- |
|
| 46 |
AAEL008778 |
ENSANGP00000021867 |
1.6E-103 |
2L-21C |
Yes |
- |
- |
- |
|
| 14 |
47 |
AAEL005065 |
ENSANGP00000018910 |
6E-159 |
2R-16C |
Yes |
CG6746 |
3.7E-134 |
- |
| 48 |
AAEL005085 |
ENSANGP00000018909 |
6.3E-084 |
2R-16C |
Yes |
CG10652 |
2.5E-078 |
- |
|
| 49 |
AEL005237 |
ENSANGP00000018845 |
4.9E-130 |
2R-16C |
Yes |
CG1298 |
2.4E-095 |
- |
|
| 50 |
AAEL005229 |
ENSANGP00000019493 |
3.7E-122 |
2R-16C |
Yes |
CG6746 |
8.3E-090 |
- |
|
| 51 |
AAEL005218 |
ENSANGG00000016433 |
7.7E-151 |
2R-16B |
Yes |
CG10624 |
1.9E-121 |
- |
|
|
|
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|
Orthology was determined for each transcript from all 14 BACs. The presence of synteny was also determined for orthologous blocks of transcripts when more than one transcript was present on the BAC clone. |
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|
Lobo et al. Genome Biology 2007 8:R88 doi:10.1186/gb-2007-8-5-r88 |
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