Table 3 |
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|
The genome of Fracisella tularensis supspecies tularensis Schu S4 encodes specific functions |
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|
Gene accession number |
Size of the predicted protein |
G+C content (%) |
Gene namea |
Gene product descriptiona |
Functional categoryb |
|
|
|
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|
Genes inactivated or deleted in novicida and holarctica subspecies |
FTT0097 |
181 |
31.1 |
- |
Hypothetical protein FTT0097 |
Hypothetical |
|
FTT0432 |
469 |
30.3 |
speA |
Putative arginine decarboxylase |
Other metabolism |
|
|
FTT0435 |
286 |
34.9 |
- |
Carbon-nitrogen hydrolase family protein |
Other metabolism |
|
|
FTT0496 |
254 |
33.0 |
- |
Hypothetical protein FTT0496 |
Hypothetical |
|
|
FTT0525 |
218 |
25.9 |
- |
Hypothetical protein FTT0525 |
Hypothetical |
|
|
FTT0528 |
125 |
29.7 |
- |
Hypothetical protein FTT0528 |
Hypothetical |
|
|
FTT0677c |
258 |
27.2 |
- |
Hypothetical protein FTT0677c |
Hypothetical |
|
|
FTT0754c |
111 |
24.0 |
- |
Hypothetical membrane protein |
Hypothetical |
|
|
FTT0939c |
314 |
28.2 |
add |
Adenosine deaminase |
Nucleotides and nucleosides metabolism |
|
|
FTT1080c |
292 |
24.8 |
- |
Hypothetical membrane protein |
Hypothetical |
|
|
FTT1122c |
156 |
36.9 |
- |
Hypothetical lipoprotein |
Hypothetical |
|
|
FTT1598 |
944 |
34.3 |
- |
Hypothetical membrane protein |
Hypothetical |
|
|
FTT1666c |
295 |
27.8 |
- |
3-Hydroxyisobutyrate dehydrogenase |
No functional role assigned |
|
|
FTT1667 |
78 |
26.5 |
- |
Hypothetical protein FTT1667 |
Hypothetical |
|
|
FTT1766 |
218 |
33.5 |
- |
O-methyltransferase |
Cell wall/LPS/capsule |
|
|
FTT1781c |
249 |
30.7 |
- |
Hypothetical protein FTT1781c |
Hypothetical |
|
|
FTT1784c |
102 |
23.2 |
- |
Hypothetical protein FTT1784c |
Hypothetical |
|
|
FTT1787c |
203 |
28.7 |
- |
Transporter, LysE family |
Transport |
|
|
FTT1789 |
264 |
29.1 |
- |
Hypothetical protein FTT1789 |
Hypothetical |
|
|
|
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|
Sequences specific to the tularensis subspecies |
FTT1066c |
124 |
27.6 |
- |
Hypothetical protein FTT1066c |
Hypothetical |
|
FTT1068c |
192 |
20.7 |
- |
Hypothetical protein FTT1068c |
Hypothetical |
|
|
FTT1069c |
301 |
28.3 |
- |
Hypothetical protein FTT1069c |
Hypothetical |
|
|
FTT1071c |
168 |
33.5 |
- |
Hypothetical protein FTT1071c |
Hypothetical |
|
|
FTT1072 |
209 |
31.6 |
- |
Hypothetical protein FTT1072 |
Hypothetical |
|
|
FTT1073c |
123 |
31.6 |
- |
Hypothetical protein FTT1073c |
Hypothetical |
|
|
FTT1308c |
202 |
29.1 |
- |
Hypothetical protein FTT1308c |
Hypothetical |
|
|
FTT1580c |
176 |
26.4 |
- |
Hypothetical protein FTT1580c |
Hypothetical |
|
|
FTT1791 |
120 |
30.1 |
- |
Hypothetical protein FTT1791 |
Hypothetical |
|
|
|
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|
aAs published in the annotation of the genome of Schu S4. bThe functional categories were assigned manually for this study. LPS, lipopolysaccharide. |
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|
Rohmer et al. Genome Biology 2007 8:R102 doi:10.1186/gb-2007-8-6-r102 |
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