Table 2 |
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|
Sequencing data for the 9 Nthi strains sequenced with 454-technology |
||||||
| H. influenzae strain |
40×70 plates sequenced |
454 read coverage |
No. of Newbler contigs |
PCR gap closure? |
4 kb clone library? |
Final no. of contigs |
|
|
||||||
| 3655 |
2 |
30× |
59 |
No |
No |
59 |
| PittAA |
1 |
23× |
88 |
Yes |
No |
38 |
| PittEE |
2 |
42× |
49 |
Yes |
4× cover |
12 |
| PittGG |
1 |
21× |
60 |
No |
Yes* |
60 |
| PittHH |
2 |
48× |
73 |
No |
No |
73 |
| PittII |
1 |
16× |
205 |
No |
Yes |
205 |
| 22.4-21 |
1 |
19× |
69 |
No |
No |
69 |
| R3021 |
2 |
35× |
51 |
No |
No |
51 |
| 22.1-21 |
1 |
19× |
71 |
No |
No |
71 |
|
|
||||||
|
*Clone library not incorporated in present analysis. |
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|
Hogg et al. Genome Biology 2007 8:R103 doi:10.1186/gb-2007-8-6-r103 |
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