Table 4

Proteins identified within the soluble sub-proteome of O. anthropi containing predicted export signal peptides

Accesion no. (NCBI)

Function

Signal peptide

17982947

Methionyl-tRNA synthetase

MSPLTNFFSRAYHA

17983887

Dihydroxy-acid dehydratase

MKMPPYRSRTTTHGRNMAGA

17982453*

Hypothetical protein (immunoreactive 28 kDa omp)

MNTRASNFLAASFSTIMLVGAFSLPAFA

17983949

3-Deoxy-manno-oculosonate cytidylyltransferase

MVLLPPRKTARVGTRRKPVFLSQTCANG

17984491*

Lipoprotein (ABC transporter substrate binding protein)

MSSVLSRYALTRRAGLKALLFTAAALTVGFASAPSHA

27353255

Transriptional regulatory protein

MRAFTRFSYSHS

17982679

Protein translation elongation factor Tu

MCWRLSGSRTKRTTAMA

17982015*

Malate dehydrogenase

MRKETIMARNKIALIGSGMIGGTLA

17982340*

Periplasmic dipeptide transport protein precursor

MGCARQAFPWRRTIMKFYQKLLAATALVALMSGAASA

17982205

Transketolase

MLCVPLPSGASSRKAA

17982141

ATP synthase F1, beta chain

MAKAATPKTTAAAEA

17982826

DNA-binding protein HU alpha

MPMNKNELVA

17982154*

Leucine, isoleucine, valine, threonine and alanine binding protein

MGVPTMRKTLFSGVALAAVIAFGGSAWA

17983192*

General L-amino acid-binding periplasmic protein AAPJ precursor

MKKTLMTGVLGAAALFGIASGASA

17982682

50S ribosomal protein L11

MAKKVAGQLKLQVPAGA

17983290

Dihydrodipicolinate synthase

MLGVPSICFRSSRMLKGSITA

86283673*

Dipeptide ABC transporter, substrate binding

MMITRLSRKFRLLSAGAALSLLMMAAPSAFA

Putative signal peptides were predicted as described by Tjalsma et al. [47] and Pugsley [48]. *Proteins likely to be secreted via the Sec pathway. Signal peptide: the hydrophobic H-domain is in italics; positively charged amino acids are underlined; the signal peptide cleavage sites comprise the last three amino acid residues and are in bold.

Graham et al. Genome Biology 2007 8:R110   doi:10.1186/gb-2007-8-6-r110