Research
LongSAGE analysis of skeletal muscle at three prenatal stages in Tongcheng and Landrace pigs
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* Corresponding author: Kui Li likuihau@yahoo.com
- † Equal contributors
1 Department of Gene and Cell Engineering, State Key Laboratory of Animal Nutrition, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100094, PR China
2 Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education of China, Huazhong Agricultural University, Wuhan 430070, PR China
3 Shanghai Huaguan Biochip Co. Ltd, Shanghai, 201203, PR China
4 Life and Environment Science College, Shanghai Normal University, Shanghai, 200234, PR China
Genome Biology 2007, 8:R115 doi:10.1186/gb-2007-8-6-r115
Published: 16 June 2007Additional files
Additional data file 1:
LongSAGE tags expressed differentially in Tongcheng pigs.
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Additional data file 2:
LongSAGE tags expressed differentially in Landrace pigs.
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Additional data file 3:
Genes expressed differentially between breeds at 33 dpc.
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Additional data file 4:
Genes expressed differentially between breeds at 65 dpc.
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Additional data file 5:
Genes expressed differentially between breeds at 90 dpc.
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Additional data file 6:
Cluster analysis was based on 1,400 and 1,201 transcripts differentially expressed during skeletal muscle development in Tongcheng and Landrace pigs, respectively. SAGE libraries are plotted on the x-axis, and tag abundance, plotted as a fraction of the total tags for a gene in the library in question, is shown on the y-axis. T = Tongcheng; L = Landrace; numbers 33, 65, and 90 indicate days post coitus. Eight clusters for Tongcheng pig are shown in (A1-A8). Landrace clusters are shown in (B1-B8).
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Additional data file 7:
References for the genes listed in Table 4.
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Additional data file 8:
GenBank accession numbers of the cDNA sequences obtained from GLGI experiments.
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