Table 2 |
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|
First induced/repressed pathway and first induced/repressed elementary mode in particular stress conditions |
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| Stress condition |
First pathway |
P value |
First elementary mode (EM1) |
P value |
|
|
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| Ash [34], repressed |
sce00230 (purine metabolism) |
2.7e-8 |
sce00230.em279 (part of purine metabolism) |
1e-11 |
| Pentanol [34], repressed |
sce00230 (purine metabolism) |
3.3e-6 |
sce00230.em341 (part of purine metabolism) |
1.8e-8 |
| Tetrachloro-isophthalonitrile [34], repressed |
sce00230 (purine metabolism) |
2.5e-8 |
sce00230.em280 (part of purine metabolism) |
3.3e-10 |
| Stationary phase [33], induced |
sce00020 (citrate cycle) |
3.4e-14 |
sce00020.em36 (part of citrate cycle) |
5.9e-16 |
| Heat shock [32], induced |
sce00500 (starch and sucrose metabolism) |
3.8e-4 |
sce00500.em13 (part of starch and sucrose metabolism) |
4.2e-6 |
|
|
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|
Results given by BlastSets for particular conditions. The second column gives the most significant full KEGG pathway found to be induced/repressed (that is, the one with the lowest P value, given in the third column). The fourth column gives the most significant elementary mode from EM1 found to be induced/repressed. These results are sorted from the highest to the lowest difference between the two P values. |
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|
Schwartz et al. Genome Biology 2007 8:R123 doi:10.1186/gb-2007-8-6-r123 |
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