Genome Biology

official impact factor 6.89

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Estimation and correction of non-specific binding in a large-scale spike-in experiment

Eugene F Schuster*, Eric Blanc, Linda Partridge and Janet M Thornton

Genome Biology 2007, 8:R126 doi:10.1186/gb-2007-8-6-r126

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Methodology article   Open Access Highly Accessed

Consistent annotation of gene expression arrays

BenoƮt Ballester, Nathan Johnson, Glenn Proctor, Paul Flicek BMC Genomics 2010, 11:294 (11 May 2010)

This article is part of a collection on Ensembl update 2010

Methodology article   Open Access

Background correction using dinucleotide affinities improves the performance of GCRMA

Raad Z Gharaibeh, Anthony A Fodor, Cynthia J Gibas BMC Bioinformatics 2008, 9:452 (23 October 2008)

Research article   Open Access

A comprehensive re-analysis of the Golden Spike data: Towards a benchmark for differential expression methods

Richard D Pearson BMC Bioinformatics 2008, 9:164 (26 March 2008)

Method   Open Access

Correcting for sequence biases in present/absent calls

Eugene F Schuster, Eric Blanc, Linda Partridge, Janet M Thornton Genome Biology 2007, 8:R125 (26 June 2007)

Correction of non-specific binding for both PM and MM probes using probe-sequence models can partially remove the probe-sequence bias in Affymetrix microarray experiments and result in better performance of the MAS 5.0 algorithm.