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Morphine effects on striatal transcriptome in mice

Michal Korostynski email, Marcin Piechota email, Dorota Kaminska email, Wojciech Solecki email and Ryszard Przewlocki email

Department of Molecular Neuropharmacology, Institute of Pharmacology PAS, Smetna 12, 31-343, Krakow, Poland

author email corresponding author email

Genome Biology 2007, 8:R128doi:10.1186/gb-2007-8-6-r128

Published: 28 June 2007

Subject areas: Genome studies, Neurobiology, Model organisms, Molecular biology


Additional files

Additional data file 1:

Lists of probe sets and gene names altered by strain (3457) and morphine treatment (661) as well as with significant interaction (48) are available as separate sheets. List of transcripts with differences in both the factors (178) was also included. In addition, genes reported in previous gene expression studies on morphine action in a brain are indicated.

Format: XLS Size: 465KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional data file 2:

The results were obtained using fold change (>1.2) of gene expression level compared with the saline control group. Effects of morphine treatment were analyzed in all of the strains as well as separately in each of them. Numbers of probe sets correspond to those in Table 2.

Format: XLS Size: 223KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional data file 3:

Presented are significant functional categories (GO terms) enriched with genes regulated in response to acute and/or chronic morphine, along with lists of probe sets and gene names classified to each GO category.

Format: XLS Size: 107KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional data file 4:

Results for selected genes are presented as mean (± standard error) compared with the saline control group. List of Taqman assays used in qPCR experiments with ID and exon boundaries is included.

Format: XLS Size: 32KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional data file 5:

The expression level (MBEI PM/MM algorithm) of genes altered by acute and/or chronic morphine (699 probe sets) and behavioral data were normalized using z-score transformation. Associations were computed using the Pearson's correlation.

Format: XLS Size: 367KB Download file

This file can be viewed with: Microsoft Excel Viewer


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