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Transcriptional recapitulation and subversion of embryonic colon development by mouse colon tumor models and human colon cancer

Sergio Kaiser†, Young-Kyu Park†, Jeffrey L Franklin, Richard B Halberg, Ming Yu, Walter J Jessen, Johannes Freudenberg, Xiaodi Chen, Kevin Haigis, Anil G Jegga, Sue Kong, Bhuvaneswari Sakthivel, Huan Xu, Timothy Reichling, Mohammad Azhar, Gregory P Boivin, Reade B Roberts, Anika C Bissahoyo, Fausto Gonzales, Greg C Bloom, Steven Eschrich, Scott L Carter, Jeremy E Aronow, John Kleimeyer, Michael Kleimeyer, Vivek Ramaswamy, Stephen H Settle, Braden Boone, Shawn Levy, Jonathan M Graff, Thomas Doetschman, Joanna Groden, William F Dove, David W Threadgill, Timothy J Yeatman, Robert J Coffey and Bruce J Aronow*

Genome Biology 2007, 8:R131 doi:10.1186/gb-2007-8-7-r131

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Increased epithelial stem cell traits in advanced endometrial endometrioid carcinoma

Shing-Jyh Chang, Tao-Yeuan Wang, Chan-Yen Tsai, Tzu-Fang Hu, Margaret Chang, Hsei-Wei Wang BMC Genomics 2009, 10:613 (16 December 2009)

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Multivariate gene expression analysis reveals functional connectivity changes between normal/tumoral prostates

André Fujita, Luciana Gomes, João Sato, Rui Yamaguchi, Carlos Thomaz, Mari Sogayar, Satoru Miyano BMC Systems Biology 2008, 2:106 (5 December 2008)

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Analysis of gene expression in a developmental context emphasizes distinct biological leitmotifs in human cancers

Kamila Naxerova, Carol J Bult, Anne Peaston, Karen Fancher, Barbara B Knowles, Simon Kasif, Isaac S Kohane Genome Biology 2008, 9:R108 (8 July 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

A systematic analysis of the relationship between the neoplastic and developmental transcriptome provides an outline of global trends in cancer gene expression.

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Novel insights into the relationships between dendritic cell subsets in human and mouse revealed by genome-wide expression profiling

Scott H Robbins, Thierry Walzer, Doulaye Dembélé, Christelle Thibault, Axel Defays, Gilles Bessou, Huichun Xu, Eric Vivier, MacLean Sellars, Philippe Pierre, Franck R Sharp, Susan Chan, Philippe Kastner, Marc Dalod Genome Biology 2008, 9:R17 (24 January 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Genome-wide expression profiling of mouse and human leukocytes reveal conserved transcriptional programs of plasmacytoid or conventional dendritic cell subsets.

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