Table 1

Expression of promoter-GFP reporters for transcripts enriched in the embryonic pan-neural, larval pan-neural or A-class motor neuron datasets



Pan-neural
 A-class



Cosmid
 Gene
 Protein
 EP fold change
 LP fold change
 In neurons*
 Fold change
 UNC-4 neuron(s)*
C01G6.4
Predicted E3 ubiquitin ligase
 1.8
 -
 √
 -
 VA, DA
VF11C1L.1
 ppk-3
 PIP kinase
 1.8
 -
 √
 -
 VA, DA
C25D7.8
Novel
 1.9
 -
 √
 -
 VA, DA
F08G12.1

3.0
 -
 √
 -
 VA, DA
M79.1
 abl-1
 Abelson kinase
 2.3
 -
 √
 -
 VA, DA
F25G6.4
 acr-15
 Acetylcholine receptor
 -
 4.9
 √
 -
 VA, DA
T27A1.6
 mab-9
 Transcription factor
 -
 1.7
 √
 -
 DA
F39G3.8
 tig-2
 TGF-β
 -
 1.8
 √
 -
 VA, DA
T19C4.5
Novel
 -
 2.0
-
CC4.2
 nlp-15
 Neuropeptide
 -
 6.5
 √
 -
C18H9.7
 rpy-1
 Rapsyn
 -
 2.7
 √
 -
 DA
Y71D11A.5
Ligand-gated ion channel
 2.1
 1.8
 √
 -
C04E12.7
Phospholipid scramblase
 -
 3.2
 √
 1.8
 VA, DA
F36A2.4
 twk-30
 K+ channel
 -
 2.1
 √
 5.1
 VA, DA
Y71H9A.3
 sto-4
 Stomatin
 -
 3.0
 √
 1.6
 VA
F29G6.2
Novel
 -
 3.2
 √
 1.6
 VA, DA,SAB, I5, AVF
C44B11.3
 mec-12
 Alpha-tubulin
 -
 5.9
 √
 1.9
 VA, DA
T23D8.2
 tsp-7
 Tetraspanin
 -
 3.5
 √
 4.8
 VA, DA
T05C12.2
 acr-14
 Acetylcholine receptor
 -
 1.5
 √
 3.1
 DA
F33D4.3
 flp-13
 Neuropeptide
 -
 7.1
 √
 7.9
 I5
C11D2.6
 nca-1
 Ca++ channel
 -
 2.3
 √
 2.2
 VA, DA
E03D2.2
 nlp-9
 Neuropeptide
 -
 3.1
 √
 2.5
 VA
F55C12.4
Novel
 -
 3.5
 √
 2.1
 DA
F43C9.4
 mig-13
 CUB domain
 -
 1.8
 √
 2.8
 VA, DA
F39B2.8
Predicted membrane protein
 1.7
 3.5
 √
 2.1
 VA, DA
K02E10.8
 syg-1
 Ig domain
 1.8
 1.8
 √
 1.8
 VA, DA
ZC21.2
 trp-1
 Ca++ channel
 1.9
 2.2
 √
 1.9
 VA, DA
Y47D3B.2a
 nlp-21
 Neuropeptide
 3.9
 8.3
 √
 3.7
 VA, DA
F09C3.2
Phosphatase
 1.9
 2.7
 √
 1.7
 VA, DA
T27E9.9
Ligand-gated ion channel
 2.3
 4.0
 √
 3.1
Y34D9B.1
 mig-1
 Frizzled-like
 -
 -
 √
 1.6
 VA, DA

*GFP expression in neurons (check mark), and in A-class motor neurons (DA, VA, SAB, I5). GFP expression was typically determined in L2 larvae. Full expression patterns can be found in Additional data file 17. Expression patterns for some of these GFP reporters have been previously reported: T27A1.6, F39G3.8, T19C4.5, CC4.2, C18H9.7, F36A2.4, F29G6.2, T23D8.2, T05C12.2, F33D4.3, C11D2.6, E03D2.2, F55C12.4, F43C9.4, K02E10.8, ZC21.2, Y47D3B.2a, F09C3.2 [5]; F33D4.3 [43]; CC4.2, E03D2.2 [96]; F36A2.4, [121]; F43C9.4, [122]. Y47D3B.2a, [123].

Von Stetina et al. Genome Biology 2007 8:R135   doi:10.1186/gb-2007-8-7-r135

Open Data