|
Transcripts enriched in C. elegans neurons |
||||
| Category |
Embryonic pan-neural |
Larval pan-neural |
Embryonic A-class |
Larval A-class |
|
|
||||
| Ion channels/receptors/membrane proteins |
122 |
156 |
60 |
41 |
| Acetylcholine receptors |
13 |
24 |
9 |
9 |
| GABA receptors |
1 |
4 |
3 |
|
| Glutamate receptors |
8 |
8 |
1 |
2 |
| Potassium channels |
11 |
24 |
8 |
10 |
| Calcium channels |
8 |
10 |
7 |
4 |
| DEG/ENaC channels |
3 |
10 |
1 |
1 |
| Stomatins |
3 |
7 |
2 |
1 |
| Other ligand-gated ion channels |
6 |
13 |
2 |
2 |
| Gap junction proteins (innexins) |
4 |
4 |
1 |
1 |
| Symporters/exchangers/transporters |
24 |
27 |
12 |
3 |
| Other membrane proteins |
41 |
25 |
17 |
5 |
| Axon guidance |
4 |
8 |
8 |
3 |
| Adhesion/Ig domain |
6 |
17 |
10 |
11 |
| Cytoskeleton-related |
33 |
34 |
16 |
5 |
| Transcriptional control |
90 |
91 |
38 |
10 |
| Homeobox |
8 |
28 |
3 |
3 |
| Hormone receptors |
24 |
15 |
5 |
1 |
| Aryl-hydrocarbon receptors |
1 |
3 |
1 |
|
| SMADs |
3 |
1 |
1 |
|
| HMG box |
5 |
5 |
||
| HLH factors |
2 |
4 |
1 |
1 |
| Other transcription factors |
32 |
25 |
13 |
4 |
| General factors |
18 |
8 |
14 |
|
| Kinase/phosphatase |
82 |
79 |
51 |
18 |
| GPCR signaling |
107 |
169 |
42 |
25 |
| G-protein coupled receptors |
85 |
137 |
33 |
18 |
| G-proteins |
8 |
10 |
3 |
3 |
| Regulators of G-protein signaling (GTPases, GEFs, GRKs) |
7 |
8 |
4 |
2 |
| Adenylate/guanylate cyclases |
7 |
14 |
2 |
2 |
| Rab/Rho/Rac GTPase signaling |
17 |
7 |
7 |
2 |
| Neuropeptides |
39 |
58 |
11 |
13 |
| FMRFamide-like (flp) |
13 |
20 |
4 |
5 |
| Neuropeptide-like (nlp) |
13 |
18 |
3 |
4 |
| Insulin-like |
9 |
11 |
2 |
1 |
| TGF-beta |
1 |
3 |
1 |
1 |
| Pro-protein convertases |
3 |
6 |
1 |
3 |
| Calcium binding |
18 |
26 |
12 |
9 |
| Synaptic vesicle associated |
38 |
53 |
25 |
17 |
| RNA binding |
22 |
14 |
22 |
3 |
| Ubiquitin associated |
39 |
19 |
12 |
3 |
| Enzymes |
199 |
103 |
111 |
30 |
| Collagens |
2 |
1 |
5 |
24 |
| Other |
297 |
205 |
174 |
44 |
| Unnamed/uncharacterized |
159 |
127 |
161 |
56 |
| Unclassified |
363 |
395 |
230 |
98 |
| Total |
1,637 |
1,562 |
995 |
412 |
Von Stetina et al. Genome Biology 2007 8:R135 doi:10.1186/gb-2007-8-7-r135 |
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