Table 3 |
|||||
|
Major transcription factor families enriched in C. elegans neurons |
|||||
| Transcription factor families |
Fold change |
||||
|
|
|
||||
| Cosmid name |
Common name |
Embryonic pan-neural |
Larval pan-neural |
Embryonic A-class |
Larval A-class |
|
|
|||||
| Homeobox |
|||||
| C40H5.5 |
ttx-3 |
1.6 |
1.5 |
||
| C33D12.1 |
ceh-31 |
1.6 |
|||
| D1007.1 |
ceh-17 |
1.6 |
|||
| K02B12.1 |
ceh-6 |
1.6 |
1.6 |
||
| T13C5.4 |
3.3 |
1.6 |
|||
| T26C11.7 |
ceh-39 |
1.6 |
|||
| ZC64.3 |
ceh-18 |
1.6 |
|||
| C18B12.3 |
1.7 |
||||
| C28A5.4 |
ceh-43 |
1.7 |
|||
| F56A12.1 |
unc-39 |
1.8 |
|||
| W03A3.1 |
ceh-10 |
1.8 |
|||
| C10G8.6 |
ceh-34 |
1.9 |
|||
| C17H12.9 |
2 |
||||
| F55B12.1 |
ceh-24 |
2 |
|||
| ZC123.3 |
1.6 |
2 |
|||
| C30A5.7 |
unc-86 |
2.1 |
|||
| T26C11.5 |
ceh-41 |
1.6 |
2.1 |
||
| C39E6.4 |
mls-2 |
2.3 |
|||
| F01D4.6 |
mec-3 |
2.6 |
|||
| R08B4.2 |
2.6 |
||||
| B0564.10 |
unc-30 |
2.2 |
2.7 |
||
| W05E10.3 |
ceh-32 |
2.7 |
|||
| F26C11.2 |
unc-4 |
2.8 |
13.2 |
9.0 |
|
| C37E2.4 |
ceh-36 |
2.9 |
|||
| R07B1.1 |
vab-15 |
2.9 |
|||
| Y54F10AM.4 |
ceh-44 |
3.3 |
2.1 |
||
| F58E6.10 |
unc-42 |
2.4 |
3.8 |
||
| ZC247.3 |
lin-11 |
5.2 |
|||
| C07E3.5 |
1.7 |
||||
| F46C8.5 |
ceh-14 |
1.7 |
|||
| W06A7.3 |
ret-1 |
1.8 |
|||
| Y113G7A.6 |
ttx-1 |
2.8 |
|||
| Hormone receptors |
|||||
| Y94H6A.1 |
1.5 |
||||
| F47C10.3 |
1.6 |
||||
| F47C10.7 |
1.6 |
||||
| F56E3.4 |
fax-1 |
1.7 |
|||
| H01A20.1 |
nhr-3 |
1.8 |
1.7 |
1.9 |
|
| R09G11.2 |
nhr-1 |
1.7 |
|||
| T03G6.2 |
nhr-40 |
1.7 |
|||
| Y39B6A.17 |
nhr-95 |
1.6 |
1.7 |
1.8 |
|
| C24G6.4 |
nhr-47 |
2 |
1.8 |
||
| K06B4.8 |
2 |
||||
| K06B4.1 |
nhr-51 |
2.5 |
2.1 |
||
| K06B4.2 |
nhr-52 |
2.1 |
|||
| F21D12.1 |
nhr-21 |
2.2 |
|||
| C49F5.4 |
2.9 |
||||
| F07C3.10 |
nhr-63 |
4 |
|||
| C06C6.4 |
nhr-67 |
1.8 |
|||
| C08F8.8 |
nhr-124 |
1.5 |
|||
| C17E7.8 |
nhr-116 |
2.3 |
|||
| F09C6.9 |
3.3 |
1.9 |
|||
| F16B4.9 |
1.9 |
||||
| F31F4.12 |
1.6 |
||||
| F41B5.9 |
nhr-96 |
2.5 |
1.7 |
||
| F44C8.11 |
1.8 |
||||
| F44C8.9 |
1.7 |
||||
| F48G7.11 |
2 |
||||
| F59E11.8 |
1.8 |
||||
| K06B4.10 |
nhr-88 |
1.8 |
|||
| K08A2.5 |
nhr-71 |
1.5 |
|||
| K11E4.5 |
1.8 |
||||
| R07B7.15 |
nhr-104 |
1.7 |
|||
| R11E3.5 |
1.8 |
||||
| T07C5.4 |
nhr-44 |
3.2 |
|||
| T19A5.4 |
nhr-59 |
1.9 |
|||
| T27B7.1 |
nhr-115 |
1.7 |
|||
| T27B7.4 |
nhr-65 |
2.9 |
|||
| Y17D7A.3 |
1.5 |
||||
| Y67D8B.2 |
1.8 |
||||
| Aryl-hydrocarbon receptors |
|||||
| C25A1.11 |
aha-1 |
1.7 |
|||
| C41G7.5 |
ahr-1 |
1.7 |
|||
| C56C10.10 |
2.2 |
2 |
2.3 |
||
| SMADs |
|||||
| F01G10.8 |
daf-14 |
1.7 |
|||
| F25E2.5 |
daf-3 |
1.9 |
|||
| F37D6.6 |
tag-68 |
2.2 |
2.3 |
2.0 |
|
| HMG box |
|||||
| F40E10.2 |
sox-3 |
1.6 |
1.5 |
||
| T22B7.1 |
egl-13 |
1.6 |
|||
| T05A7.4 |
hmg-11 |
2.3 |
2.1 |
||
| F47G4.6 |
2.3 |
||||
| K08A8.2 |
sox-2 |
2.5 |
2.9 |
||
| C12D12.5 |
4.7 |
||||
| Y17G7A.1 |
hmg-12 |
1.8 |
|||
| HLH factors |
|||||
| C43H6.8 |
hlh-15 |
4.4 |
1.6 |
||
| F58A4.7 |
hlh-11 |
1.6 |
|||
| Y16B4A.1 |
unc-3 |
2.9 |
3 |
4.9 |
|
| F48D6.3 |
hlh-13 |
3 |
|||
| W02C12.3 |
1.8 |
||||
|
|
|||||
|
Von Stetina et al. Genome Biology 2007 8:R135 doi:10.1186/gb-2007-8-7-r135 |
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