Table 3 |
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|
Major transcription factor families enriched in C. elegans neurons |
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|
Transcription factor families |
Fold change |
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|
|
|
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|
Cosmid name |
Common name |
Embryonic pan-neural |
Larval pan-neural |
Embryonic A-class |
Larval A-class |
|
|
|||||
|
Homeobox |
|||||
|
C40H5.5 |
ttx-3 |
1.6 |
1.5 |
||
|
C33D12.1 |
ceh-31 |
1.6 |
|||
|
D1007.1 |
ceh-17 |
1.6 |
|||
|
K02B12.1 |
ceh-6 |
1.6 |
1.6 |
||
|
T13C5.4 |
3.3 |
1.6 |
|||
|
T26C11.7 |
ceh-39 |
1.6 |
|||
|
ZC64.3 |
ceh-18 |
1.6 |
|||
|
C18B12.3 |
1.7 |
||||
|
C28A5.4 |
ceh-43 |
1.7 |
|||
|
F56A12.1 |
unc-39 |
1.8 |
|||
|
W03A3.1 |
ceh-10 |
1.8 |
|||
|
C10G8.6 |
ceh-34 |
1.9 |
|||
|
C17H12.9 |
2 |
||||
|
F55B12.1 |
ceh-24 |
2 |
|||
|
ZC123.3 |
1.6 |
2 |
|||
|
C30A5.7 |
unc-86 |
2.1 |
|||
|
T26C11.5 |
ceh-41 |
1.6 |
2.1 |
||
|
C39E6.4 |
mls-2 |
2.3 |
|||
|
F01D4.6 |
mec-3 |
2.6 |
|||
|
R08B4.2 |
2.6 |
||||
|
B0564.10 |
unc-30 |
2.2 |
2.7 |
||
|
W05E10.3 |
ceh-32 |
2.7 |
|||
|
F26C11.2 |
unc-4 |
2.8 |
13.2 |
9.0 |
|
|
C37E2.4 |
ceh-36 |
2.9 |
|||
|
R07B1.1 |
vab-15 |
2.9 |
|||
|
Y54F10AM.4 |
ceh-44 |
3.3 |
2.1 |
||
|
F58E6.10 |
unc-42 |
2.4 |
3.8 |
||
|
ZC247.3 |
lin-11 |
5.2 |
|||
|
C07E3.5 |
1.7 |
||||
|
F46C8.5 |
ceh-14 |
1.7 |
|||
|
W06A7.3 |
ret-1 |
1.8 |
|||
|
Y113G7A.6 |
ttx-1 |
2.8 |
|||
|
Hormone receptors |
|||||
|
Y94H6A.1 |
1.5 |
||||
|
F47C10.3 |
1.6 |
||||
|
F47C10.7 |
1.6 |
||||
|
F56E3.4 |
fax-1 |
1.7 |
|||
|
H01A20.1 |
nhr-3 |
1.8 |
1.7 |
1.9 |
|
|
R09G11.2 |
nhr-1 |
1.7 |
|||
|
T03G6.2 |
nhr-40 |
1.7 |
|||
|
Y39B6A.17 |
nhr-95 |
1.6 |
1.7 |
1.8 |
|
|
C24G6.4 |
nhr-47 |
2 |
1.8 |
||
|
K06B4.8 |
2 |
||||
|
K06B4.1 |
nhr-51 |
2.5 |
2.1 |
||
|
K06B4.2 |
nhr-52 |
2.1 |
|||
|
F21D12.1 |
nhr-21 |
2.2 |
|||
|
C49F5.4 |
2.9 |
||||
|
F07C3.10 |
nhr-63 |
4 |
|||
|
C06C6.4 |
nhr-67 |
1.8 |
|||
|
C08F8.8 |
nhr-124 |
1.5 |
|||
|
C17E7.8 |
nhr-116 |
2.3 |
|||
|
F09C6.9 |
3.3 |
1.9 |
|||
|
F16B4.9 |
1.9 |
||||
|
F31F4.12 |
1.6 |
||||
|
F41B5.9 |
nhr-96 |
2.5 |
1.7 |
||
|
F44C8.11 |
1.8 |
||||
|
F44C8.9 |
1.7 |
||||
|
F48G7.11 |
2 |
||||
|
F59E11.8 |
1.8 |
||||
|
K06B4.10 |
nhr-88 |
1.8 |
|||
|
K08A2.5 |
nhr-71 |
1.5 |
|||
|
K11E4.5 |
1.8 |
||||
|
R07B7.15 |
nhr-104 |
1.7 |
|||
|
R11E3.5 |
1.8 |
||||
|
T07C5.4 |
nhr-44 |
3.2 |
|||
|
T19A5.4 |
nhr-59 |
1.9 |
|||
|
T27B7.1 |
nhr-115 |
1.7 |
|||
|
T27B7.4 |
nhr-65 |
2.9 |
|||
|
Y17D7A.3 |
1.5 |
||||
|
Y67D8B.2 |
1.8 |
||||
|
Aryl-hydrocarbon receptors |
|||||
|
C25A1.11 |
aha-1 |
1.7 |
|||
|
C41G7.5 |
ahr-1 |
1.7 |
|||
|
C56C10.10 |
2.2 |
2 |
2.3 |
||
|
SMADs |
|||||
|
F01G10.8 |
daf-14 |
1.7 |
|||
|
F25E2.5 |
daf-3 |
1.9 |
|||
|
F37D6.6 |
tag-68 |
2.2 |
2.3 |
2.0 |
|
|
HMG box |
|||||
|
F40E10.2 |
sox-3 |
1.6 |
1.5 |
||
|
T22B7.1 |
egl-13 |
1.6 |
|||
|
T05A7.4 |
hmg-11 |
2.3 |
2.1 |
||
|
F47G4.6 |
2.3 |
||||
|
K08A8.2 |
sox-2 |
2.5 |
2.9 |
||
|
C12D12.5 |
4.7 |
||||
|
Y17G7A.1 |
hmg-12 |
1.8 |
|||
|
HLH factors |
|||||
|
C43H6.8 |
hlh-15 |
4.4 |
1.6 |
||
|
F58A4.7 |
hlh-11 |
1.6 |
|||
|
Y16B4A.1 |
unc-3 |
2.9 |
3 |
4.9 |
|
|
F48D6.3 |
hlh-13 |
3 |
|||
|
W02C12.3 |
1.8 |
||||
|
|
|||||
|
Von Stetina et al. Genome Biology 2007 8:R135 doi:10.1186/gb-2007-8-7-r135 |
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