Table 2

Summary of pig BAC end sequence alignments to NCBI build 35 of the human genome

Human-pig sequence matches

Homologous crosslink matches

Matches to human exons




Human chromosome

Available human sequence (Mb)

Total

Per Mb

Total

Per Mb

Total

Per Mb


1

222.8

24,510

110

14,393

65

3,049

13.7

2

237.5

27,269

115

15,755

66

2,279

9.6

3

194.6

23,691

122

13,991

72

1,949

10.0

4

187.2

20,347

109

11,449

61

1,272

6.8

5

177.7

20,497

115

11,950

67

1,509

8.5

6

167.3

18,898

113

10,856

65

1,586

9.5

7

154.8

15,036

97

8,736

57

1,270

8.2

8

142.6

14,344

101

8,251

58

1,048

7.3

9

117.8

12,597

107

7,286

62

1,092

9.3

10

131.6

13,709

104

8,073

61

1,281

9.7

11

131.1

14,893

114

8,375

64

1,573

12.0

12

130.3

14,817

114

8,427

65

1,778

13.6

13

95.6

9,873

103

5,765

60

628

6.6

14

88.3

10,414

118

6,185

70

1,070

12.1

15

81.3

9,176

113

5,505

68

1,021

12.6

16

78.9

7,129

91

4,233

54

959

12.2

17

77.8

6,949

89

3,969

51

1,365

17.5

18

74.7

8,098

111

5,038

68

521

7.0

19

55.8

2,926

53

1,629

29

1,095

19.6

20

59.5

5,893

99

3,417

57

701

11.8

21

34.2

3,328

98

1,849

54

289

8.5

22

34.8

2,462

71

1,319

38

499

14.3

X

150.4

10,824

72

5,716

38

763

5.0

Y

24.9

62

3

2

0.1

0

0

All

2,851.5

297,742

97

172,169

56.3

28,597

10.2


Humphray et al. Genome Biology 2007 8:R139   doi:10.1186/gb-2007-8-7-r139

Open Data