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Combined analysis reveals a core set of cycling genes

Yong Lu, Shaun Mahony, Panayiotis V Benos, Roni Rosenfeld, Itamar Simon, Linda L Breeden and Ziv Bar-Joseph*

Genome Biology 2007, 8:R146 doi:10.1186/gb-2007-8-7-r146

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Phase Coupled Meta-analysis: sensitive detection of oscillations in cell cycle gene expression, as applied to fission yeast

Saumyadipta Pyne, Roee Gutman, Chang Kim, Bruce Futcher BMC Genomics 2009, 10:440 (17 September 2009)

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Genome adaptation to chemical stress: clues from comparative transcriptomics in Saccharomyces cerevisiae and Candida glabrata

Gaëlle Lelandais, Véronique Tanty, Colette Geneix, Catherine Etchebest, Claude Jacq, Frédéric Devaux Genome Biology 2008, 9:R164 (24 November 2008)

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Comparative transcriptomics of Saccharomyces cerevisiae and Candida glabrata revealed a remarkable conservation of response to drug-induced stress, despite underlying differences in the regulatory networks.

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Circular reasoning rather than cyclic expression

Lars Jensen, Ulrik de Lichtenberg, Thomas Jensen, Søren Brunak, Peer Bork Genome Biology 2008, 9:403 (23 June 2008)

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A response to Combined analysis reveals a core set of cycling genes by Y Lu, S Mahony, PV Benos, R Rosenfeld, I Simon, LL Breeden and Z Bar-Joseph. Genome Biol 2007, 8:R146.

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