Genome Biology

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Using comparative genomics to reorder the human genome sequence into a virtual sheep genome

Brian P Dalrymple*, Ewen F Kirkness, Mikhail Nefedov, Sean McWilliam, Abhirami Ratnakumar, Wes Barris, Shaying Zhao, Jyoti Shetty, Jillian F Maddox, Margaret O'Grady, Frank Nicholas, Allan M Crawford, Tim Smith, Pieter J de Jong, John McEwan, V Hutton Oddy, Noelle E Cockett and the International Sheep Genomics Consortium

Genome Biology 2007, 8:R152 doi:10.1186/gb-2007-8-7-r152

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Research article   Open Access

A first-generation integrated tammar wallaby map and its use in creating a tammar wallaby first-generation virtual genome map

Chenwei Wang, Janine E Deakin, Willem Rens, Kyall R Zenger, Katherine Belov, Jennifer A Marshall Graves, Frank W Nicholas BMC Genomics 2011, 12:422 (19 August 2011)

This article is part of a collection on The tammar wallaby genome...

Research article   Open Access

Analysis of BAC-end sequences in rainbow trout: Content characterization and assessment of synteny between trout and other fish genomes

Carine Genet, Patrice Dehais, Yniv Palti, Guangtu Gao, Frederick Gavory, Patrick Wincker, Edwige Quillet, Mekki Boussaha BMC Genomics 2011, 12:314 (14 June 2011)

Research article   Open Access

Comparative analysis of catfish BAC end sequences with the zebrafish genome

Hong Liu, Yanliang Jiang, Shaolin Wang, Parichart Ninwichian, Benjaporn Somridhivej, Peng Xu, Jason Abernathy, Huseyin Kucuktas, Zhanjiang Liu BMC Genomics 2009, 10:592 (10 December 2009)

Proceedings   Open Access

Genome evolution in Reptilia: in silico chicken mapping of 12,000 BAC-end sequences from two reptiles and a basal bird

Charles Chapus, Scott V Edwards BMC Genomics 2009, 10(Suppl 2):S8 (14 July 2009)

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Bos taurus genome assembly

Yue Liu, Xiang Qin, Xing-Zhi Song, Huaiyang Jiang, Yufeng Shen, K James Durbin, Sigbjørn Lien, Matthew Kent, Marte Sodeland, Yanru Ren, Lan Zhang, Erica Sodergren, Paul Havlak, Kim C Worley, George M Weinstock, Richard A Gibbs BMC Genomics 2009, 10:180 (24 April 2009)

This article is part of a collection on Bovine: the companion...

The assembly of the bovine genome used both bacterial artificial chromosome (BAC) and whole genome shotgun (WGS) sequences, exploiting the strengths of each to provide a more accurate and comprehensive coverage of the genome.

Research article   Open Access

A multiway analysis for identifying high integrity bovine BACs

Abhirami Ratnakumar, Wesley Barris, Sean McWilliam, Rudiger Brauning, John C McEwan, Warren M Snelling, Brian P Dalrymple BMC Genomics 2009, 10:46 (23 January 2009)

Research article   Open Access

A map of the class III region of the sheep major histocompatibilty complex

J Qin, C Mamotte, NE Cockett, JD Wetherall, DM Groth BMC Genomics 2008, 9:409 (11 September 2008)

Research   Open Access Highly Accessed

A physical map of the bovine genome

Warren M Snelling, Readman Chiu, Jacqueline E Schein, Matthew Hobbs, Colette A Abbey, David L Adelson, Jan Aerts, Gary L Bennett, Ian E Bosdet, Mekki Boussaha, Rudiger Brauning, Alexandre R Caetano, Marcos M Costa, Allan M Crawford, Brian P Dalrymple, André Eggen, Annelie Everts-van der Wind, Sandrine Floriot, Mathieu Gautier, Clare A Gill, Ronnie D Green, Robert Holt, Oliver Jann, Steven JM Jones, Steven M Kappes, John W Keele, Pieter J de Jong, Denis M Larkin, Harris A Lewin, John C McEwan et al. Genome Biology 2007, 8:R165 (14 August 2007)

A new physical map of the bovine genome has been constructed by integrating data from genetic and radiation hybrid maps, and a new bovine BAC map, with the bovine genome draft assembly.