Table 4 |
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|
Sheep chromosome details |
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|
Chromosome |
HSA |
CGCs |
Synteny blocksa |
Markers |
Mb |
Minus gaps (Mb)b |
Map length (cM)c |
Cytogenetic Mbd |
|
|
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|
OAR1 |
1, 2, 3, 21 |
102 |
9 |
119 |
304.1 |
276.3 |
324.4 |
294 |
|
OAR2 |
1, 2, 4, 8, 9 |
86 |
21 |
102 |
277.8 |
259.2 |
301.3 |
261 |
|
OAR3 |
2, 9, 12, 22 |
101 |
35 |
106 |
274.3 |
251.3 |
303.2 |
246 |
|
OAR4 |
7 |
46 |
10 |
41 |
126.6 |
126.6 |
147.8 |
135 |
|
OAR5 |
1, 5, 19 |
51 |
16 |
39 |
121.1 |
117 |
158.9 |
126 |
|
OAR6 |
4 |
37 |
6 |
56 |
123.1 |
120 |
155.7 |
126 |
|
OAR7 |
5, 14, 15 |
19 |
9 |
49 |
114.8 |
96.4 |
148.9 |
117 |
|
OAR8 |
6 |
19 |
3 |
39 |
96.8 |
96.8 |
128 |
111 |
|
OAR9 |
6, 8 |
44 |
5 |
42 |
114.7 |
111.6 |
126.9 |
105 |
|
OAR10 |
13 |
28 |
6 |
27 |
114.1 |
95.8 |
100.2 |
99 |
|
OAR11 |
17 |
41 |
21 |
37 |
78.8 |
78.8 |
109.6 |
87 |
|
OAR12 |
1 |
34 |
16 |
31 |
92.7 |
82.4 |
106.4 |
96 |
|
OAR13 |
10, 20 |
45 |
22 |
32 |
102.9 |
98.8 |
128.3 |
99 |
|
OAR14 |
16, 19 |
42 |
10 |
39 |
87.3 |
78.2 |
120 |
84 |
|
OAR15 |
11 |
48 |
9 |
41 |
85.3 |
82 |
123.8 |
96 |
|
OAR16 |
5 |
15 |
2 |
31 |
80.6 |
77.5 |
84.7 |
84 |
|
OAR17 |
4, 12, 22 |
40 |
11 |
45 |
84.7 |
84.7 |
130 |
84 |
|
OAR18 |
14, 15 |
43 |
17 |
36 |
98.9 |
80.3 |
127.7 |
84 |
|
OAR19 |
3 |
21 |
6 |
28 |
65.3 |
65.3 |
72.1 |
75 |
|
OAR20 |
6 |
14 |
6 |
41 |
60.2 |
58.6 |
103.3 |
69 |
|
OAR21 |
11 |
32 |
7 |
19 |
49.1 |
49.1 |
75.5 |
63 |
|
OAR22 |
10 |
12 |
5 |
18 |
54.5 |
54.5 |
82.9 |
63 |
|
OAR23 |
18 |
17 |
4 |
40 |
76.1 |
74.7 |
85 |
78 |
|
OAR24 |
7, 16 |
26 |
10 |
30 |
70.5 |
62.4 |
102.1 |
63 |
|
OAR25 |
1, 10 |
26 |
8 |
26 |
54.4 |
52.3 |
68.3 |
63 |
|
OAR26 |
3, 4, 8 |
19 |
9 |
19 |
55.4 |
53.9 |
71.1 |
57 |
|
OARX |
X |
164 |
2 |
40 |
154.8 |
152.9 |
131.35 |
144 |
|
|
||||||||
|
Total |
1,172 |
285 |
1,173 |
3,018.9 |
2837.3 |
3,657.4 |
3,000 |
|
|
|
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|
aNumber of sets of cMegaBAC-CGCs with consecutive numbers and same orientation as in the human genome. bPredicted lengths of chromosomes after removal of large gaps, >1 Mb, in the human genome sequence. cMap lengths calculated from Sheep Map 4.6 using the sex-averaged lengths, except for the X chromosome where the length of the female map was used. dChromosome lengths calculated from the sheep ISCNDB (2000) standard cytogenetic maps [47], assuming a genome size, excluding the Y chromosome, of 3 Gb. BAC, bacterial artificial chromosome; CGC, comparative genome contig; Gb, gigabases; HSA, human chromosome; Mb, megabases; OAR, sheep chromosome. |
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|
Dalrymple et al. Genome Biology 2007 8:R152 doi:10.1186/gb-2007-8-7-r152 |
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