Genome Biology

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Novel metrics for evaluating the functional coherence of protein groups via protein semantic network

Bin Zheng and Xinghua Lu*

Genome Biology 2007, 8:R153 doi:10.1186/gb-2007-8-7-r153

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Quantification of protein group coherence and pathway assignment using functional association

Meghana Chitale, Shriphani Palakodety, Daisuke Kihara BMC Bioinformatics 2011, 12:373 (19 September 2011)

Methodology article   Open Access Highly Accessed

GO-based Functional Dissimilarity of Gene Sets

Norberto Díaz-Díaz, Jesús S Aguilar-Ruiz BMC Bioinformatics 2011, 12:360 (1 September 2011)

Methodology article   Open Access Highly Accessed

Assessment of protein set coherence using functional annotations

Monica Chagoyen, Jose M Carazo, Alberto Pascual-Montano BMC Bioinformatics 2008, 9:444 (20 October 2008)

A novel approach to evaluating the homogeneity of protein sets on the basis of the global similarity of their Gene Ontology functional annotations compliments methods for validating microarray clusters and protein-protein interaction networks.