Table 3 |
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|
RASTA-Bacteria predictions for newly sequenced genomes |
||||||||||
|
Organism |
ccdAB |
higBA |
mazEF |
parDE |
phd/doc |
relBE |
vapBC |
hipBA |
UnClass. |
Total |
|
|
||||||||||
|
A. phagocytophilum |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
|
Arthrobacter aurescens |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
|
Azoarcus sp. BH720 |
0 |
0 |
0 |
0 |
0 |
1 |
2 |
0 |
1 |
4 |
|
Bartonella bacilliformis |
0 |
1 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
2 |
|
Burkholderia xenovorans |
0 |
2 |
1 |
0 |
0 |
2 |
8 |
5 |
15 |
33 |
|
C. P. amoebophila |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
|
Dehalococcoides sp. |
0 |
2 |
0 |
0 |
0 |
0 |
0 |
3 |
2 |
7 |
|
Deinococcus geothermalis |
0 |
0 |
1 |
0 |
0 |
0 |
2 |
0 |
3 |
6 |
|
Ehrlichia chaffeensis |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
|
Frankia alni ACN14a |
0 |
1 |
4 |
0 |
0 |
3 |
3 |
1 |
0 |
12 |
|
Gramella forsetii KT0803 |
1 |
3 |
1 |
5 |
0 |
1 |
1 |
0 |
0 |
12 |
|
Granulibacter bethesdensis |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
4 |
|
Lawsonia intracellularis |
0 |
0 |
0 |
2 |
0 |
1 |
1 |
0 |
0 |
4 |
|
Magnetococcus sp. |
1 |
6 |
0 |
4 |
1 |
1 |
4 |
0 |
0 |
17 |
|
Methanococcoides burtonii |
0 |
2 |
1 |
0 |
1 |
0 |
0 |
0 |
1 |
5 |
|
Methanospirillum hungatei |
0 |
2 |
3 |
0 |
0 |
7 |
15 |
0 |
2 |
30 |
|
Mycobacterium bovis |
2 |
1 |
9 |
2 |
0 |
3 |
48 |
0 |
0 |
65 |
|
Mycobacterium sp. KMS |
0 |
1 |
2 |
0 |
2 |
1 |
5 |
0 |
3 |
14 |
|
Myxococcus xanthus |
0 |
4 |
0 |
0 |
0 |
0 |
0 |
1 |
3 |
10 |
|
Nanoarchaeaum equitans |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
|
O. yellows phytoplasma |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
|
P. naphthalenivorans |
0 |
2 |
2 |
1 |
1 |
4 |
10 |
4 |
1 |
25 |
|
Pyrobaculum islandicum |
0 |
1 |
0 |
0 |
0 |
0 |
2 |
0 |
2 |
5 |
|
Shewanella sp. |
0 |
1 |
0 |
2 |
0 |
0 |
0 |
1 |
3 |
8 |
|
Thermofilum pendens |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
|
Trichodesmium erythraeum |
0 |
0 |
2 |
2 |
0 |
0 |
0 |
1 |
1 |
6 |
|
Wigglesworthia |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
|
Wolbachia |
0 |
0 |
0 |
0 |
0 |
7 |
0 |
0 |
0 |
7 |
|
|
||||||||||
|
Unclass., unclassified. |
||||||||||
|
Sevin and Barloy-Hubler Genome Biology 2007 8:R155 doi:10.1186/gb-2007-8-8-r155 |
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