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Resolution: standard / high Figure 5.
Pam clustering over IR module in external ER- cohorts. Heatmap of gene expression of seven-gene IR-module in ER- samples of the (a) UPP and (b) JRH-2 cohorts. Shown are the clusters over-expressing (purple) and under-expressing
(yellow) the IR module, as predicted by the pam algorithm. Good outcome samples are
shown in gray, and poor outcome samples in black. Green indicates relative under-expression,
and red indicates relative over-expression. (c) Kaplan-Meier survival curves over combined external cohorts (for UPP end-point was
disease-specific survival, and for JRH-2 it was recurrence-free survival), with the
number of events and samples in each of the two predicted groups. ER, estrogen receptor;
pam, partitioning around medoids.
Teschendorff et al. Genome Biology 2007 8:R157 doi:10.1186/gb-2007-8-8-r157 |