Table 2

Summary of BAC clones, sequences, and matches with composite map markers


CHORI-240
RPCI-42
TAMBT
All

FPC map
169,283
81,437
40,077
290,797
Clone sequences*




     Single BES
26,900
4,472
5,513
36,885
     Paired BES
121,205
20,173
8,487
149,865
     Other
109
13

122
     All
148,214
24,658
14,000
186,872
% Clones with sequence
87.6
30.3
34.9
64.3
Match marker
21,077
3,770
744
25,591

*Clones with sequence deposited in GenBank genome survey sequence division. Single BES: sequence available for only one clone end. Paired BES: sequence available for both clone ends. Other: BAC clones with plasmid sub-clone sequences in addition to end sequences. Clone and marker sequences align, or clone and marker sequences match same Btau 3.1 whole-genome shotgun sequence contig [GenBank:AAFC03000000].

Snelling et al. Genome Biology 2007 8:R165   doi:10.1186/gb-2007-8-8-r165