Table 4 |
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|
Summary of map contig coverage of bovine chromosomes |
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|
Chromosome |
No. of contigs |
Estimated size (Mbp)* |
Genome assembly size (Mbp) |
Syntenic human chromosomes |
Human genome coverage (Mbp)† |
|
|
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|
1 |
16 |
186 |
146 |
3, 21 |
155 |
|
2 |
10 |
160 |
125 |
1,2,15 |
135 |
|
3 |
11 |
145 |
116 |
1,2 |
118 |
|
4 |
12 |
141 |
110 |
7 |
119 |
|
5 |
18 |
143 |
118 |
12,22 |
115 |
|
6 |
19 |
135 |
111 |
4 |
117 |
|
7 |
14 |
135 |
100 |
1,5,19 |
105 |
|
8 |
11 |
129 |
103 |
4,8,9 |
106 |
|
9 |
15 |
128 |
95 |
6 |
108 |
|
10 |
8 |
121 |
95 |
5,14,15 |
98 |
|
11 |
16 |
123 |
101 |
2,9 |
113 |
|
12 |
15 |
108 |
77 |
13 |
91 |
|
13 |
8 |
104 |
83 |
10,20 |
91 |
|
14 |
11 |
97 |
82 |
8 |
96 |
|
15 |
13 |
101 |
75 |
11 |
75 |
|
16 |
11 |
98 |
72 |
1 |
76 |
|
17 |
8 |
92 |
70 |
4,12,22 |
81 |
|
18 |
11 |
82 |
62 |
16,19 |
70 |
|
19 |
12 |
78 |
63 |
17 |
70 |
|
20 |
5 |
83 |
68 |
5 |
75 |
|
21 |
7 |
80 |
63 |
14,15 |
63 |
|
22 |
2 |
73 |
59 |
3 |
63 |
|
23 |
10 |
62 |
48 |
6 |
56 |
|
24 |
12 |
73 |
60 |
18 |
71 |
|
25 |
10 |
54 |
42 |
7,16 |
49 |
|
26 |
5 |
58 |
47 |
10 |
51 |
|
27 |
2 |
48 |
43 |
4,8 |
41 |
|
28 |
3 |
52 |
40 |
1,10 |
44 |
|
29 |
5 |
61 |
45 |
11 |
44 |
|
X |
79 |
138 |
99 |
X |
119 |
|
|
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|
Total |
379 |
3088 |
2434 |
2616 |
|
|
|
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|
*Size estimated from clone fingerprint data. †Based on span of BES alignments to the reference human genome sequence. |
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|
Snelling et al. Genome Biology 2007 8:R165 doi:10.1186/gb-2007-8-8-r165 |
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