Research
The roles of binding site arrangement and combinatorial targeting in microRNA repression of gene expression
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* Corresponding author: Zemin Zhang zhang.zemin@gene.com
Department of Bioinformatics, Genentech Inc., 1 DNA Way, South San Francisco, CA 94080, USA
Genome Biology 2007, 8:R166 doi:10.1186/gb-2007-8-8-r166
Published: 14 August 2007Additional files
Additional data file 1:
Different analyses performed using the relative expression metric.
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Additional data file 2:
Figures using alternative data sets that support the observed trends.
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Additional data file 3:
Description of the tables of the raw relative expression data and associated data found in Additional data files 4-8.
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Additional data file 4:
Relative expression values for all PicTar predicted interactions using the Lu/Ramaswamy set of expression data.
Format: TAB Size: 1.7MB Download file
Additional data file 5:
Relative expression values for all PicTar predicted interactions using the NCI-60 set of expression data.
Format: TAB Size: 2.9MB Download file
Additional data file 6:
Relative expression values for all rna22 predicted interactions using the Lu/Ramaswamy set of expression data.
Format: TAB Size: 1.9MB Download file
Additional data file 7:
Relative expression values for specific pairs of binding sites (<1000 bp apart) responsive to a miRNA, using Lu/Ramaswamy data and PicTar predictions.
Format: TAB Size: 1.6MB Download file
Additional data file 8:
Relative expression values for specific pairs of binding sites (<1000 bp apart) responsive to a miRNA, using NCI-60 data and PicTar predictions.
Format: TAB Size: 2.7MB Download file