Table 3

Overlap of binding sites of SDC-3


ChIPOTle
MPeak 1
MPeak 2
MPeak 3
MA2C (p = 10-5)

ChIPOTle
100%
65.97%
87.08%
92.28%
67.06%
MPeak 1
56.69%
100%
17.26%
26.57%
68.25%
MPeak 2
37.16%
8.74%
100%
21.01%
36.07%
MPeak 3
25.84%
8.14%
12.70%
100%
24.72%
MA2C (p = 10-5)
97.54%
97.91%
98.05%
99.64%
100%

Percentages of SDC-3 binding sites from a method in columns overlapping with those from a method in rows (MPeak 1 denotes MPeak results from replicate 1, and so forth; two regions were considered to be overlapping if they shared at least 1 bp).

Song et al. Genome Biology 2007 8:R178   doi:10.1186/gb-2007-8-8-r178