Table 1 |
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|
Effect of different factors on the quantitative expression of target genes |
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|
Before considering multi-regulators |
Two-regulator motifs |
Three-regulator motifs |
||||
|
|
||||||
|
Possible time delays from regulator(s) to target genes |
+ |
+ |
+ |
+ |
+ |
+ |
|
Conversion efficiency (non-negative) |
+ |
+ |
+ |
+ |
+ |
|
|
Possible opposite regulation between regulators |
+ |
+ |
+ |
+ |
||
|
Possible time delays among regulators |
+ |
+ |
||||
|
Number of significantly correlated motifs (interactions) |
231 |
35 |
48 |
179 |
75 |
272 |
|
Number of motifs (interactions) |
6,105 |
544 |
544 |
544 |
161 |
161 |
|
Percentage |
3.78% |
6.43% |
8.82% |
32.9% |
21.7% |
67.1% |
|
|
||||||
|
Plus signs indicate that the corresponding factor is considered in the corresponding case. |
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|
He et al. Genome Biology 2007 8:R181 doi:10.1186/gb-2007-8-9-r181 |
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