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Cross-species cluster co-conservation: a new method for generating protein interaction networks

Anis Karimpour-Fard^†, Corrella S Detweiler^†, Kimberly D Erickson, Lawrence Hunter and Ryan T Gill^*

* Corresponding author: Ryan T Gill rtg@colorado.edu
† Equal contributors

Genome Biology 2007, 8:R185 doi:10.1186/gb-2007-8-9-r185

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Predicting protein linkages in bacteria: Which method is best depends on task

Anis Karimpour-Fard, Sonia M Leach, Ryan T Gill, Lawrence E Hunter BMC Bioinformatics 2008, 9:397 (24 September 2008)

Abstract | Full text | PDF | PubMed

The topology of the bacterial co-conserved protein network and its implications for predicting protein function

Anis Karimpour-Fard, Sonia M Leach, Lawrence E Hunter, Ryan T Gill BMC Genomics 2008, 9:313 (30 June 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Improving protein function prediction methods with integrated literature data

Aaron P Gabow, Sonia M Leach, William A Baumgartner, Lawrence E Hunter, Debra S Goldberg BMC Bioinformatics 2008, 9:198 (15 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Investigation of factors affecting prediction of protein-protein interaction networks by phylogenetic profiling

Anis Karimpour-Fard, Lawrence Hunter, Ryan T Gill BMC Genomics 2007, 8:393 (29 October 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

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