|
Top 20 categories for breast cancer classification |
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| Rank |
Category |
FDR |
|
|
||
| 1 |
Breast_cancer_estrogen_signalling GEArray |
0.02 |
| 1 |
Drug_resistance_and_metabolism BioCarta |
0.02 |
| 1 |
FRASOR_ER_UP Frasor_et_al_2004 |
0.02 |
| 4 |
mta3Pathway BioCarta |
0.041 |
| 5 |
Fatty_Acid_Synthesis BioCarta |
0.065 |
| 6 |
Cell_cycle_checkpoint II |
0.065 |
| 6 |
p35alzheimersPathway BioCarta |
0.065 |
| 6 |
FRASOR_ER_DOWN Frasor_et_al_2004 |
0.065 |
| 9 |
L-phenylalanine catabolism |
0.068 |
| 9 |
UDP-glucose metabolism |
0.068 |
| 9 |
Cell_cycle_regulator |
0.068 |
| 12 |
Electron_transporter_activity BioCarta |
0.078 |
| 13 |
skp2e2fPathway BioCarta |
0.1 |
| 14 |
Fatty_acid_metabolism BioCarta |
0.1 |
| 15 |
Ubiquinone biosynthesis |
0.102 |
| 16 |
MAP00010_Glycolysis_Gluconeogenesis GenMAPP |
0.12 |
| 16 |
MAPKKK_cascade GO |
0.12 |
| 18 |
G1Pathway BioCarta |
0.134 |
| 18 |
MAP00280_Valine_leucine_and_isoleucine_degradation GenMAPP |
0.134 |
| 20 |
Response to metal ion |
0.144 |
|
FDR, false discovery rate; GO, Gene Ontology; LeFE, Learner of Functional Enrichment. | ||
Eichler et al. Genome Biology 2007 8:R187 doi:10.1186/gb-2007-8-9-r187 |
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