Table 1

Set of mouse samples selected for our analysis from StemBase

Class

Samples

Replicates

SampleIDs

Adipose derived stem cells

1

3

S199

Dermis derived stem cells

1

3

S200

Embryonal carcinoma

4

12

S129, S130, S131, S132

Embryonic

8

23

S219, S220, S164, S165, S166, S167, S168, S169

Embryonic fibroblasts

2

6

S180, S286

Embryonic stem cell differentiation

35

105

S153, S154, S155, S156, S157, S158, S159, S181, S174, S241, S175, S206, S207, S208, S209, S210, S211, S212, S213, S215, S216, S217, S242, S243, S244, S251, S252, S245, S250, S246, S247, S248, S249, S127, S128

Hematopoietic

12

33

S233, S234, S235, S236, S237, S147, S291, S292, S293, S294, S295, S296

Mammary

5

15

S255, S256, S311, S312, S313

Muscle derived stem cells

3

7

S274, S184, S197

Neural

3

10

S271, S272, S198

Osteoblast differentiation

7

21

S185, S186, S188, S190, S192, S194, S196

Retinal derived stem cells

2

3

S232, S240

Various stem cells (SC) are represented in the data set. All original data including sample and experiment descriptions are accessible from the StemBase homepage [64].

Krzyzanowski and Andrade-Navarro Genome Biology 2007 8:R193   doi:10.1186/gb-2007-8-9-r193