Gene classes within gene expression profiles identified using EASE. Significantly enriched gene classes (p value < 0.05) with genes that were differentially regulated following infection with the four pathogens (S. m, S. marcescens; E. f, E. faecalis; E. c, E. carotovora; P. l, P. luminescens). Expression profiles were either (a) similar, or (b) different across pathogens. Numbers shown indicate the number of genes significant in that gene class, whilst relevant biological themes are indicated with lines in different colors.
Wong et al. Genome Biology 2007 8:R194 doi:10.1186/gb-2007-8-9-r194