Table 4 |
||||
|
Candidate genes for dsRNA pptake in T. castaneum |
||||
|
Gene name |
Dm gene ID |
Tc gene ID |
Biological function |
Reference |
|
|
||||
|
Arf72A |
CG6025 |
08443 |
Endosome transport |
[62] |
|
AP 50 |
CG7057 |
11923 |
Endocytosis |
[62] |
|
Clathrin hc |
CG9012 |
15014 |
Endocytosis |
[62] |
|
IdICP |
CG6177 |
10886 |
Exocytosis |
[62] |
|
Light |
CG18028 |
15204 |
Lysosomal transport |
[62] |
|
Nina C |
CG54125 |
14087 |
Rhodopsin mediated signaling |
[62] |
|
Rab 7 |
CG5915 |
06036 |
Endosome transport |
[62] |
|
Eater |
CG6124 |
XP_969372* |
Inate immune response/phagocytosis |
[61] |
|
Sr-CI |
CG4099 |
Inate immune response/phagocytosis |
[61] |
|
|
Sr-CII |
CG8856 |
15640 |
Inate immune response/phagocytosis |
[61] |
|
Sr-CIII |
CG31962 |
Inate immune response/phagocytosis |
[61] |
|
|
Sr-CIV |
CG3212 |
Inate immune response/phagocytosis |
[61] |
|
|
Vha16 |
CG3161 |
11025 |
ATP synthase/ATPase |
[62] |
|
VhaSFD |
CG17332 |
06281 |
ATP synthase/ATPase |
[62] |
|
Gmer |
CG3495 |
14956 |
Metabolism |
[62] |
|
P13K59F |
CG5373 |
00620 |
Lipid metabolism |
[62] |
|
Saposin r |
CG12070 |
00449 |
Lipid metabolism |
[62] |
|
Egghead |
CG9659 |
08154 |
Oogenesis |
[62] |
|
CG4572 |
02692 |
Peptidase |
[62] |
|
|
CG5053 |
07768 |
Signal transduction |
[62] |
|
|
CG8184 |
04152 |
Ubiquitin ligase |
[62] |
|
|
CG8773 |
16254 |
Peptidase |
[62] |
|
|
CG5382 |
09067 |
Zinc finger transcription factor |
[62] |
|
|
CG5434 |
12172 |
Translation regulation |
[62] |
|
|
CG3248 |
12410 |
Unknown |
[62] |
|
|
CG3911 |
14009 |
Unknown |
[62] |
|
|
CG8671 |
04825 |
Unknown |
[62] |
|
|
CG5161 |
07973 |
Unknown |
[62] |
|
|
|
||||
|
*XP_969372 is a NCBI prediction that partially matches Tc_02053; however, Tc_02053 seems to be a chimera of at least three genes. Dm: Drosophila melanogasater. Tc: Tribolium castaneum. |
||||
|
Tomoyasu et al. Genome Biology 2008 9:R10 doi:10.1186/gb-2008-9-1-r10 |
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