Table 4

Candidate genes for dsRNA pptake in T. castaneum

Gene name

Dm gene ID

Tc gene ID

Biological function

Reference


Arf72A

CG6025

08443

Endosome transport

[62]

AP 50

CG7057

11923

Endocytosis

[62]

Clathrin hc

CG9012

15014

Endocytosis

[62]

IdICP

CG6177

10886

Exocytosis

[62]

Light

CG18028

15204

Lysosomal transport

[62]

Nina C

CG54125

14087

Rhodopsin mediated signaling

[62]

Rab 7

CG5915

06036

Endosome transport

[62]

Eater

CG6124

XP_969372*

Inate immune response/phagocytosis

[61]

Sr-CI

CG4099

Inate immune response/phagocytosis

[61]

Sr-CII

CG8856

15640

Inate immune response/phagocytosis

[61]

Sr-CIII

CG31962

Inate immune response/phagocytosis

[61]

Sr-CIV

CG3212

Inate immune response/phagocytosis

[61]

Vha16

CG3161

11025

ATP synthase/ATPase

[62]

VhaSFD

CG17332

06281

ATP synthase/ATPase

[62]

Gmer

CG3495

14956

Metabolism

[62]

P13K59F

CG5373

00620

Lipid metabolism

[62]

Saposin r

CG12070

00449

Lipid metabolism

[62]

Egghead

CG9659

08154

Oogenesis

[62]

CG4572

02692

Peptidase

[62]

CG5053

07768

Signal transduction

[62]

CG8184

04152

Ubiquitin ligase

[62]

CG8773

16254

Peptidase

[62]

CG5382

09067

Zinc finger transcription factor

[62]

CG5434

12172

Translation regulation

[62]

CG3248

12410

Unknown

[62]

CG3911

14009

Unknown

[62]

CG8671

04825

Unknown

[62]

CG5161

07973

Unknown

[62]


*XP_969372 is a NCBI prediction that partially matches Tc_02053; however, Tc_02053 seems to be a chimera of at least three genes. Dm: Drosophila melanogasater. Tc: Tribolium castaneum.

Tomoyasu et al. Genome Biology 2008 9:R10   doi:10.1186/gb-2008-9-1-r10

Open Data