Gene expression variation in African and European populations of Drosophila melanogaster

Stephan Hutter^* , Sarah S Saminadin-Peter^* , Wolfgang Stephan and John Parsch

Section of Evolutionary Biology, Department of Biology, University of Munich, Grosshaderner Strasse, Planegg-Martinsried, 82152, Germany

author email corresponding author email* Contributed equally

Genome Biology 2008, 9:R12doi:10.1186/gb-2008-9-1-r12


Published:	21 January 2008

Subject areas: Evolution, Ecology, Genetics

Additional files

Additional data file 1:

Probes expressed in the 16-node experiment and the relative expression levels for each strain and the P-values for each pairwise comparison as calculated by BAGEL.

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Additional data file 2:

Number of differentially expressed probes for each of the 120 pairwise comparisons between strains at the P < 0.001 significance level, as well as the random expectations.

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Additional data file 3:

ΔCt values obtained by qPCR for the 12 genes surveyed.

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Additional data file 4:

The table includes relative expression levels, P-values and over-represented GO categories.

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Additional data file 5:

Comparison of the neighbor-joining trees of the 16 strains created using DNA polymorphism data and the gene expression distance matrix.

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Additional data file 6:

Comparison of the variability of non sex-biased genes between the X chromosome and the autosomes.

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