Genome Biology

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Towards defining the nuclear proteome

J Lynn Fink, Seetha Karunaratne, Amit Mittal, Donald M Gardiner, Nicholas Hamilton, Donna Mahony, Chikatoshi Kai, Harukazu Suzuki, Yosihide Hayashizaki and Rohan D Teasdale*

Genome Biology 2008, 9:R15 doi:10.1186/gb-2008-9-1-r15

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Research article   Open Access

The proteins of intra-nuclear bodies: a data-driven analysis of sequence, interaction and expression

Nurul Mohamad, Mikael Bodén BMC Systems Biology 2010, 4:44 (13 April 2010)

Methodology article   Open Access

Development of a high-throughput method for the systematic identification of human proteins nuclear translocation potential

Trinh Hoat, Nicolas Bertin, Noriko Ninomiya, Shiro Fukuda, Kengo Usui, Jun Kawai, Yoshihide Hayashizaki, Harukazu Suzuki BMC Cell Biology 2009, 10:69 (22 September 2009)

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Statistical and visual differentiation of subcellular imaging

Nicholas A Hamilton, Jack TH Wang, Markus C Kerr, Rohan D Teasdale BMC Bioinformatics 2009, 10:94 (22 March 2009)

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Protein-protein interaction as a predictor of subcellular location

Chang Shin, Simon Wong, Melissa J Davis, Mark A Ragan BMC Systems Biology 2009, 3:28 (25 February 2009)

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Identification and correction of abnormal, incomplete and mispredicted proteins in public databases

Alinda Nagy, Hédi Hegyi, Krisztina Farkas, Hedvig Tordai, Evelin Kozma, László Bányai, László Patthy BMC Bioinformatics 2008, 9:353 (27 August 2008)

The MisPred tool improves gene predictions within public databases by using five distinct approaches to detect incomplete or incorrect sequences, such as missing signal peptides or problems with domain integrity.