Table 3

Expression of control genes in human cells


Lymphocytes
 Dendritic cells
 Myeloid cells


Probe set ID
 Genes
 NK
 CD8 T
 CD4 T
 B
 pDC
 BDCA1
 BDCA3
 Mono
 Neu
206804_at
 CD3G
 858 ± 71
 1,760 ± 241
 1,975 ± 132
 53 ± 6
 <50
 <50
 <50
 <50
 52 ± 4
213539_at
 CD3D
 5,413 ± 238
 7,134 ± 635
 6,291 ± 285
 276 ± 24
 <50
 <50
 51 ± 2
 112 ± 9
 276 ± 4
205456_at
 CD3E
 247 ± 21
 569 ± 67
 679 ± 91
 <50
 <50
 <50
 <50
 <50
 <50
210031_at
 CD3Z
 8,688 ± 181
 5,223 ± 218
 4,749 ± 123
 2,996 ± 217
 56 ± 10
 60 ± 17
 54 ± 7
 914 ± 96
 132 ± 15
209671_x_at
 TCR@
 147 ± 16
 3,127 ± 260
 3,462 ± 170
 71 ± 7
 <50
 <50
 <50
 <50
 111 ± 16
205758_at
 CD8A
 911 ± 26
 5,259 ± 217
 67 ± 10
 79 ± 16
 <50
 <50
 <50
 <50
 99 ± 7
207979_s_at
 CD8B
 77 ± 9
 3,596 ± 299
 <50
 <50
 <50
 <50
 <50
 <50
 53 ± 5
203547_at
 CD4
 <50
 <50
 391 ± 20
 83 ± 20
 1,301 ± 119
 1,004 ± 74
 278 ± 61
 205 ± 34
 <50
206398_s_at
 CD19
 <50
 51 ± 1
 <50
 1,726 ± 115
 <50
 <50
 <50
 57 ± 12
 <50
212843_at
 NCAM1 (CD56)
 2,074 ± 96
 144 ± 14
 65 ± 2
 135 ± 9
 <50
 <50
 82 ± 17
 52 ± 3
 <50
207314_x_at
 KIR3DL2
 3,131 ± 172
 454 ± 14
 227 ± 18
 265 ± 16
 <50
 <50
 <50
 59 ± 8
 <50
208203_x_at
 KIR2DS5
 3,472 ± 140
 444 ± 7
 236 ± 10
 284 ± 14
 <50
 <50
 <50
 <50
 <50
239975_at
 HLA-DPB2
 <50
 <50
 <50
 63 ± 22
 777 ± 701
 1,565 ± 519
 2,056 ± 577
 <50
 <50
210184_at
 ITGAX (CD11c)
 1,017 ± 50
 112 ± 37
 166 ± 17
 752 ± 45
 74 ± 21
 2,151 ± 430
 729 ± 98
 1,284 ± 115
 2,133 ± 196
210313_at
 LILRA4 (ILT7)
 226 ± 10
 117 ± 13
 346 ± 42
 1,109 ± 76
 7,916 ± 612
 230 ± 16
 1,659 ± 1,183
 524 ± 41
 <50
206148_at
 IL3RA (CD123)
 84 ± 3
 59 ± 8
 91 ± 2
 324 ± 9
 4,728 ± 365
 61 ± 10
 116 ± 110
 120 ± 3
 74 ± 12
1552552_s_at
 CLEC4C (BDCA2)
 93 ± 6
 61 ± 5
 99 ± 4
 408 ± 9
 6,789 ± 737
 76 ± 39
 859 ± 434
 217 ± 8
 175 ± 25
205987_at
 CD1C (BDCA1)
 76 ± 8
 61 ± 12
 159 ± 8
 1,715 ± 85
 64 ± 23
 8,313 ± 272
 722 ± 845
 560 ± 59
 <50
204007_at
 FCGR3B (CD16)
 459 ± 54
 115 ± 24
 65 ± 5
 322 ± 46
 63 ± 23
 <50
 51 ± 1
 160 ± 11
 5,554 ± 57
201743_at
 CD14
 94 ± 3
 139 ± 5
 343 ± 5
 1,274 ± 113
 <50
 202 ± 183
 <50
 7,638 ± 446
 4,621 ± 374
205786_s_at
 ITGAM (CD11b)
 5,688 ± 116
 1,980 ± 147
 1,161 ± 71
 2,513 ± 117
 360 ± 184
 703 ± 28
 86 ± 63
 5,541 ± 193
 5,232 ± 576
208982_at
 PECAM1 (CD31)
 2,232 ± 48
 2,144 ± 91
 1,487 ± 58
 4,644 ± 102
 3,834 ± 601
 2,825 ± 290
 2,680 ± 363
 5,479 ± 219
 7,699 ± 853
205898_at
 CX3CR1
 10,056 ± 53
 6,633 ± 232
 4,351 ± 170
 6,055 ± 263
 262 ± 45
 1,296 ± 84
 362 ± 419
 5,717 ± 451
 616 ± 21
39402_at
 IL1B
 69 ± 6
 72 ± 7
 52 ± 3
 209 ± 27
 <50
 195 ± 131
 69 ± 27
 198 ± 9
 2,920 ± 183
202859_x_at
 IL8
 95 ± 7
 77 ± 6
 72 ± 5
 385 ± 26
 218 ± 185
 90 ± 9
 680 ± 561
 310 ± 17
 8,685 ± 776
207094_at
 IL8RA
 199 ± 30
 74 ± 8
 81 ± 12
 82 ± 2
 <50
 61 ± 9
 67 ± 1
 90 ± 1
 4,784 ± 521

Mono, monocyte; neu, neutrophil.

Robbins et al. Genome Biology 2008 9:R17   doi:10.1186/gb-2008-9-1-r17