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Number of IMCs, EPMs, RMs and their average number of member genes and regulators |
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| Average no. of genes/transcription factors |
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| Condition |
No. of survived IMCs |
No. of EPMs |
No. of RMs (average number of RMs per EPM) |
IMC |
EPM |
RM |
No. of confirmed transcription factors (average number of targets per transcription factor) |
|
|
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| Heat shock |
249 |
14 |
88 (6.3) |
9.8/3.2 |
102.7/11.6 |
58.9/3.0 |
67 (96.6) |
| Nitrogen depletion |
340 |
24 |
166 (6.9) |
9.1/3.3 |
77.5/13.1 |
40.3/3.1 |
96 (78.0) |
| Cell cycle |
77 |
9 |
35 (3.9) |
7.5/2.9 |
36.3/7.3 |
26.6/3.0 |
43 (31.5) |
|
For each condition, we calculated the number of retained IMCs that have at least one confirmed transcription factor. And then, total numbers of EPMs and RMs were counted. We also calculated the average number of genes and transcription factors per IMC, EPM and RM. | |||||||
Lee et al. Genome Biology 2008 9:R2 doi:10.1186/gb-2008-9-1-r2 |
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