|
Coverage and gene order of different contigs and scaffolds |
|||
| Contig/Scaffold |
Actual length* |
Coverage† |
Gene order‡ |
|
|
|||
| AACY01037482 |
5934 |
10.81 |
D→C→F→B→A |
| AACY01011678 |
5668 |
10.66 |
Full operon |
| CH026811 |
14769 |
8.78 |
Full operon |
| AACY01096779 |
10932 |
8.69 |
E→G→D→C |
| AACY01096698 |
2822 |
8.51 |
E→G→D→C |
| AACY01104100 |
6690 |
8.21 |
E→G→D→C→B→A |
| AACY01008961 |
7081 |
7.36 |
E→G→D→C |
| AACY01117014 |
7301 |
5.94 |
E→G→D→C |
| AACY01092457 |
4603 |
4.45 |
E→G→D→C |
| AACY01074747 |
3876 |
4.26 |
E→G→PLPDE_IV |
| AACY01046473 |
3887 |
3.96 |
E→G→D→C |
| AACY01056517 |
4373 |
3.85 |
E→G→D→C |
| CH025535 |
76373 |
3.72 |
E→G→D→C→F→B→X→A |
| AACY01039569 |
5041 |
3.45 |
E→G→D→C |
| AACY01065695 |
3747 |
3.37 |
E→G→D→C |
| AACY01088195 |
7958 |
3.27 |
E→G→D→C |
| CH020599 |
17648 |
3.18 |
G→D→C→F |
| AACY01010663 |
3644 |
3.17 |
E→G→D→C |
| CH006047 |
9399 |
3.03 |
Full operon |
| AACY01056487 |
4038 |
2.91 |
E→G→D→C |
| CH025058 |
36,150 |
2.69 |
B→A→E→G→D→C |
| CH025585 |
10777 |
2.59 |
Full operon |
| CH006071 |
68188 |
2.53 |
Full operon |
| AACY01110889 |
4437 |
2.43 |
F→(EG) |
| AACY01063516 |
4094 |
2.35 |
E→G→D→C |
| AACY01027084 |
3981 |
2.21 |
D→C→F→B→A |
| AACY01064621 |
5161 |
2.02 |
E→G→D→C |
| AACY01052709 |
2451 |
2.00 |
E→G→D→C |
| AACY01079380 |
1515 |
1.89 |
G→C |
| AACY01015506 |
2202 |
1.35 |
E→G→D→C |
| CH200199 |
1879 |
1.00 |
E→G→D→C |
| CH199785 |
1823 |
1.00 |
E→G→D→C |
| CH174161 |
1722 |
1.00 |
E→G→D→C |
|
*Actual length, number of known nucleotides; †Coverage, average number of reads covering each nucleotide; ‡Gene order, of different contigs and scaffolds. | |||
Kagan et al. Genome Biology 2008 9:R20 doi:10.1186/gb-2008-9-1-r20 |
|||