Table 8 |
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|
List of species names and their abbreviations |
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|
Species name |
Abbreviation used |
NCBI number |
|
|
||
|
Aeropyrum pernix |
Ape-1 |
Q9Y8T5 |
|
Aeropyrum pernix |
Ape-2 |
Q9Y9H2 |
|
Aquifex aeolicus |
Aae |
O67409 |
|
Arabidopsis thaliana |
Ath-1 |
P14671 |
|
Arabidopsis thaliana |
Ath-2 |
BAB10143 |
|
Archaeoglobus fulgidus |
Afu-1 |
O28672 |
|
Archaeoglobus fulgidus |
Afu-2 |
O29028 |
|
Bordetella pertussis |
Bpe |
NP_882102 |
|
Campylobacter jejuni |
Cje |
CAL34499 |
|
Pelagibacter ubique (Candidatus) HTCC1062 |
Ple |
YP_265913 |
|
Chlamydia psittaci |
Cps |
Q822W9 |
|
Chlorobium tepidum |
Cte |
Q8KF11 |
|
Corynebacterium diphtheriae |
Cdip-1 |
NP_940652 |
|
Corynebacterium diphtheriae |
Cdip-2 |
NP_940660 |
|
Escherichia coli |
Eco |
P0A879 |
|
Geobacter sulfurreducens |
Gsu |
AAT73768 |
|
Haemophilus influenzae |
Hin |
P43760 |
|
Lactococcus lactis |
Lla |
Q01998 |
|
Legionella pneumophila |
Lpn |
CAH15507 |
|
Mesorhizobium loti |
Mlo |
NP_105798 |
|
Methanobacterium thermoautotrophicum |
Mth-1 |
O27696 |
|
Methanobacterium thermoautotrophicum |
Mth-2 |
O27520 |
|
Methanococcus jannaschii |
Mja |
Q60179 |
|
Methanosarcina barkeri |
Mba |
AAZ72487 |
|
Mycobacterium bovis |
Mbo |
NP_855291 |
|
Mycobacterium tuberculosis |
Mtu |
P66984 |
|
Neisseria gonorrhoeae |
Ngo |
Q84GJ9 |
|
Neisseria meningitides |
Nme |
AAF41116 |
|
Pyrobaculum aerophilum |
Paero |
Q8ZV44 |
|
Pyrococcus abyssi |
Pab-2 |
Q9V150 |
|
Pyrococcus furiosus |
Pfu-2 |
Q8U0J5 |
|
Pyrococcus horikoshii |
Pho |
NP_143439 |
|
Rhodopseudomonas palustris |
Rpa-1 |
YP_779393 |
|
Salmonella typhimurium |
Sty |
NP_460685 |
|
Staphylococcus aureus |
Sau |
BAB42464 |
|
Streptococcus mutans |
Smu |
NP_720974 |
|
Sulfolobus solfataricus |
Sso-1 |
P50383 |
|
Sulfolobus solfataricus |
Sso-2 |
AAK41396 |
|
Thermomonospora fusca |
Tfu |
YP_289226 |
|
Thermoplasma acidophilum |
Tac |
Q9HKD2 |
|
Thermoplasma volcanium |
Tvo |
NP_111450 |
|
Thermotoga maritime |
Tma |
Q9WZ09 |
|
Xylella fastidiosa |
Xfa |
C82688 |
|
Zea mays |
Zma-1 |
P43284 |
|
Zea mays |
Zma-2 |
P43283 |
|
|
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|
Kagan et al. Genome Biology 2008 9:R20 doi:10.1186/gb-2008-9-1-r20 |
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