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Resolution: standard / high Figure 4.
Functional classification of conserved phosphosites. (a) Main classes. The height of the bars represents the percentage of phosphosites with
homologs in a specific number of different species (indicated by the color of the
bar) belonging to the different classes. The black arrows indicate groups with homologs
in a specific number of species that are significantly over-represented (arrows pointing
up) or under-represented (arrows pointing down) compared with all phosphorylation
events in that functional category. Significance was determined using a Fisher's exact
test; scores with a P value below 0.05 after Bonferroni correction were considered significant. (b) Subclasses. The numbers in the cells are the fold increase of the fraction of phosphosites
in that subclass relative to the fraction in that subclass of phosphosites without
homologs in other species (2log [sites in n species] - 2log [sites in 1 species]). Over-representation is presented in red, and under-representation
in blue. Only classes with a total of 80 or more sites and with at least one site
found in a total of four species are shown. The black boxes indicate significant under-representation
or over-representation (Fisher's exact test, P < 0.05 after Bonferroni correction).
Boekhorst et al. Genome Biology 2008 9:R144 doi:10.1186/gb-2008-9-10-r144 |