Genome Biology

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Variations in the transcriptome of Alzheimer's disease reveal molecular networks involved in cardiovascular diseases

Monika Ray, Jianhua Ruan and Weixiong Zhang*

Genome Biology 2008, 9:R148 doi:10.1186/gb-2008-9-10-r148

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Systematic identification of functional modules and cis-regulatory elements in Arabidopsis thaliana

Jianhua Ruan, Joseph Perez, Brian Hernandez, Chengwei Lei, Garry Sunter, Valerie M Sponsel BMC Bioinformatics 2011, 12(Suppl 12):S2 (24 November 2011)

Methodology article   Open Access Highly Accessed

A general co-expression network-based approach to gene expression analysis: comparison and applications

Jianhua Ruan, Angela K Dean, Weixiong Zhang BMC Systems Biology 2010, 4:8 (2 February 2010)

Proceedings   Open Access

A systems biology approach to the identification and analysis of transcriptional regulatory networks in osteocytes

Angela K Dean, Stephen E Harris, Ivo Kalajzic, Jianhua Ruan BMC Bioinformatics 2009, 10(Suppl 9):S5 (17 September 2009)