Table 6 |
|
|
Twenty-six transcription factors with known functions whose cis-regulatory elements were identified in the genes in the co-expression network |
|
|
Transcription factors |
Number of target genes |
|
|
|
|
ABI4 |
9 |
|
Arnt-Ahr |
93 |
|
ARR10 |
6 |
|
Broad-complex 3 |
10 |
|
CEBP |
20 |
|
Gfi |
8 |
|
HAND1-TCF3 |
279 |
|
Mycn |
11 |
|
Myf |
8 |
|
Prx2/PRDX2 |
17 |
|
RELA, REL |
10 |
|
RUNX1 |
4 |
|
Snail |
49 |
|
SP1 |
47 |
|
TBP |
6 |
|
E74A |
16 |
|
ELK1 |
16 |
|
SPIB |
16 |
|
Hunchback |
6 |
|
MAX |
11 |
|
USF1 |
11 |
|
ZNF42 5-13 |
27 |
|
NFIL3 |
5 |
|
Agamous |
8 |
|
GAMYB |
6 |
|
|
|
|
The 26 transcription factors and the number of target genes in module 1 that have a motif in their promoters that match to the binding sites of the known transcription factor. |
|
|
Ray et al. Genome Biology 2008 9:R148 doi:10.1186/gb-2008-9-10-r148 |
|
