Genome Biology

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KEGG spider: interpretation of genomics data in the context of the global gene metabolic network

Alexey V Antonov*, Sabine Dietmann and Hans W Mewes

Genome Biology 2008, 9:R179 doi:10.1186/gb-2008-9-12-r179

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Critical assessment of human metabolic pathway databases: a stepping stone for future integration

Miranda D Stobbe, Sander M Houten, Gerbert A Jansen, Antoine HC van Kampen, Perry D Moerland BMC Systems Biology 2011, 5:165 (14 October 2011)

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Path finding methods accounting for stoichiometry in metabolic networks

Jon Pey, JoaquĆ­n Prada, John E Beasley, Francisco J Planes Genome Biology 2011, 12:R49 (27 May 2011)

The incorporation of stoichiometry into path finding improves metabolic network analysis

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Construction of a large scale integrated map of macrophage pathogen recognition and effector systems

Sobia Raza, Neil McDerment, Paul A Lacaze, Kevin Robertson, Steven Watterson, Ying Chen, Michael Chisholm, George Eleftheriadis, Stephanie Monk, Maire O'Sullivan, Arran Turnbull, Douglas Roy, Athanasios Theocharidis, Peter Ghazal, Tom C Freeman BMC Systems Biology 2010, 4:63 (14 May 2010)

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Gene expression profiles in mouse embryo fibroblasts lacking stathmin, a microtubule regulatory protein, reveal changes in the expression of genes contributing to cell motility

Danielle N Ringhoff, Lynne Cassimeris BMC Genomics 2009, 10:343 (30 July 2009)

Software   Open Access

ChlamyCyc: an integrative systems biology database and web-portal for Chlamydomonas reinhardtii

Patrick May, Jan-Ole Christian, Stefan Kempa, Dirk Walther BMC Genomics 2009, 10:209 (4 May 2009)