Method
Singular value decomposition-based regression identifies activation of endogenous signaling pathways in vivo
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* Corresponding author: Lewis A Chodosh chodosh@mail.med.upenn.edu
1 Department of Cancer Biology, Abramson Family Cancer Research Institute, University of Pennsylvania, 421 Curie Blvd, BRB II/III 616, Philadelphia, PA 19104, USA
2 Genomics and Computational Biology Graduate Group, University of Pennsylvania School of Medicine, 423 Guardian Drive, Philadelphia, PA 19104, USA
3 Department of Mathematics, Georgetown University, 2115 G Street NW, Washington, DC 20057, USA
Genome Biology 2008, 9:R180 doi:10.1186/gb-2008-9-12-r180
Published: 18 December 2008Additional files
Additional data file 1:
Gene signature for TGFβ pathway, including probe set ID, log fold change, gene name, Entrez ID, and gene symbol.
Format: XLS Size: 85KB Download file
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Additional data file 2:
Gene signature for Ras pathway, including probe set ID, log fold change, gene name, Entrez ID, and gene symbol.
Format: XLS Size: 85KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 3:
Genes in common between TGFβ signature and Ras signature.
Format: XLS Size: 19KB Download file
This file can be viewed with: Microsoft Excel Viewer