|
Genomic regions investigated on the neo-sex chromosomes of D. miranda |
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| Probe |
Linkage |
BAC clone |
Position D. pseudoobscura |
No. of large contigs (>500 bp) |
Large contig total length |
|
|
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| Cyp6t3* |
neo-X |
CH229-18P24 |
2,919,127-3,118,766 |
61 |
191,732 |
| neo-Y |
CH229-17G1 |
2,930,284-2,999,451 |
48 |
152,913 |
|
| CG11228† |
neo-X |
CH229-9J14 |
6,378,633-6,574,929 |
12 |
212,381 |
| neo-Y |
CH229-47N8 |
6,224,922-6,574,929‡ |
40 |
101,234 |
|
| CG3167† |
neo-X |
CH229-1G8 |
7,534,774-7,718,283 |
10 |
196,418 |
| neo-Y |
CH229-11G24 |
7,575,595-7,622,144 |
42 |
150,425 |
|
| CG2269† |
neo-X |
CH229-38G20 |
9,562,050-9,772,080 |
10 |
215,404 |
| neo-Y |
CH229-20L11 |
9,560,730-9,624,726 |
46 |
136,298 |
|
| RnrS* |
neo-X |
CH229-21P17 |
12,046,872-12,252,350 |
10 |
219,495 |
| neo-Y |
CH229-3L20 |
12,166,695-12,235,653 |
53 |
166,051 |
|
| dpld† |
neo-X |
CH229-22C23 |
12,276,220-12,482,724 |
11 |
217,193 |
| neo-Y |
CH229-19H21 |
12,345,041-12,405,202 |
38 |
114,562 |
|
| CG3700* |
neo-X |
CH229-IJ13 |
17,420,039-17,614,947 |
21 |
209,018 |
| neo-Y |
CH229-8B21 |
17,417,664-17,531,578 |
33 |
224,454 |
|
|
*Sanger technology. †454 sequencing. ‡Recombinant BAC clone or large deletion on neo-Y. | |||||
Bachtrog et al. Genome Biology 2008 9:R30 doi:10.1186/gb-2008-9-2-r30 |
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