Genome Biology

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Open Access Method

Genome wide prediction of HNF4α functional binding sites by the use of local and global sequence context

Alexander E Kel1, Monika Niehof2, Volker Matys1, Rüdiger Zemlin2 and Jürgen Borlak2*

Author Affiliations

1 BIOBASE GmbH, Halchtersche Str., 38304 Wolfenbüttel, Germany

2 Fraunhofer Institute of Toxicology and Experimental Medicine, Center for Drug Research and Medical Biotechnology, Nikolai-Fuchs-Str., 30625 Hannover, Germany

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Genome Biology 2008, 9:R36 doi:10.1186/gb-2008-9-2-r36

Published: 21 February 2008

Additional files

Additional data file 1:

TRANSFAC® database annotated HNF4α binding sites.

Format: DOC Size: 182KB Download file

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Open Data

Additional data file 2:

The 375 sequences that passed our criteria.

Format: XLS Size: 158KB Download file

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Open Data