|
Genome-wide databases of candidate transcription factor binding sites |
||||
| Number |
Database properties |
Number of genes |
Number of regions |
Number of binding sites |
|
|
||||
| 1 |
Human-mouse conserved regions, 10 kilobases 5' of TSS |
8,759 |
22,582 |
1,858,800 |
| 2 |
(1) + limited to binding sites occurring both in the human and mouse CNS |
8,759 |
22,582 |
878,338 |
| 3 |
(2) + correct for possible mouse TSS differences (add 100 kilobases of mouse sequence 5' and 3') |
11,653 |
35,021 |
1,316,927 |
|
CNS, conserved noncoding sequence; TSS, transcription start site. | ||||
Van Loo et al. Genome Biology 2008 9:R66 doi:10.1186/gb-2008-9-4-r66 |
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