Genome Biology

official impact factor 6.89

Open Access Highly Access Research

The genome sequence of the model ascomycete fungus Podospora anserina

Eric Espagne1,2, Olivier Lespinet1,2, Fabienne Malagnac3,1,2, Corinne Da Silva4, Olivier Jaillon4, Betina M Porcel4, Arnaud Couloux4, Jean-Marc Aury4, Béatrice Ségurens4, Julie Poulain4, Véronique Anthouard4, Sandrine Grossetete1,2, Hamid Khalili1,2, Evelyne Coppin1,2, Michelle Déquard-Chablat1,2, Marguerite Picard1,2, Véronique Contamine1,2, Sylvie Arnaise1,2, Anne Bourdais1,2, Véronique Berteaux-Lecellier1,2, Daniel Gautheret1,2, Ronald P de Vries5, Evy Battaglia5, Pedro M Coutinho6, Etienne GJ Danchin6, Bernard Henrissat6, Riyad EL Khoury7, Annie Sainsard-Chanet7,8, Antoine Boivin7,8, Bérangère Pinan-Lucarré9, Carole H Sellem7, Robert Debuchy1,2, Patrick Wincker4, Jean Weissenbach4 and Philippe Silar3,1,2*

Author Affiliations

1 Univ Paris-Sud, Institut de Génétique et Microbiologie, UMR8621, 91405 Orsay cedex, France

2 CNRS, Institut de Génétique et Microbiologie, UMR8621, 91405 Orsay cedex, France

3 UFR de Biochimie, Université de Paris 7 - Denis Diderot, case 7006, place Jussieu, 75005, Paris, France

4 Genoscope (CEA) and UMR 8030 CNRS-Genoscope-Université d'Evry, rue Gaston Crémieux CP5706, 91057 Evry, France

5 Microbiology, Department of Biology, Utrecht University, Padulaan, 3584 CH Utrecht, The Netherlands

6 UMR 6098, Architecture et Fonction des Macromolecules Biologiques, CNRS/univ. Aix-Marseille I et II, Marseille, France

7 CNRS, Centre de Génétique Moléculaire, UPR 2167, 91198 Gif-sur-Yvette, France

8 Université Paris-Sud, Orsay, 91405, France

9 Institut de Biochimie et de Génétique Cellulaires, UMR 5095 CNRS/Université de Bordeaux 2, rue Camille St. Saëns, 33077 Bordeaux Cedex, France

For all author emails, please log on.

Genome Biology 2008, 9:R77 doi:10.1186/gb-2008-9-5-r77

Published: 6 May 2008

Additional files

Additional data file 1:

The P. anserina genome map as defined by classic genetic markers and molecular markers, mainly microsatellites, that are polymorphic between strains S and T.

Format: DOC Size: 164KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data

Additional data file 2:

CDSs potentially expressed through frame-shift and read-through.

Format: DOC Size: 25KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data

Additional data file 3:

Transposons and transposon-like elements of the P. anserina genome.

Format: DOC Size: 68KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data

Additional data file 4:

Segmental duplications in the P. anserina genome.

Format: DOC Size: 22KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data

Additional data file 5:

CDSs putatively involved in genome protection mechanisms.

Format: DOC Size: 137KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data

Additional data file 6:

CDSs involved in (hemi-)cellulose and pectin degradation.

Format: XLS Size: 117KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data