|
EST analysis |
||||||||
| Alternatively spliced transcripts |
||||||||
|
|
||||||||
| Number of sequenced cDNA clones |
Number of clusters |
Confirmed genes* |
Exon cassette |
Alternative splice site |
Retained intron |
Non-coding transcripts not covering a predicted CDS |
Antisense transcripts |
|
|
|
||||||||
| Bank |
||||||||
| Mycelium grown for 48 h |
27,291 |
6,054 |
5,780 |
1 |
155 |
137 |
322 |
19 |
| Young perithecia of less than 48 h |
7,695 |
2,392 |
2,236 |
2 |
46 |
55 |
258 |
12 |
| Perithecia older than 48 h |
7,814 |
2,373 |
2,088 |
2 |
26 |
51 |
440 |
4 |
| Ascospores 20 h after germination trigger |
5,570 |
1,589 |
1,502 |
0 |
29 |
28 |
125 |
3 |
| Senescent mycelium |
1,136 |
718 |
665 |
0 |
10 |
9 |
59 |
4 |
| Incompatible mycelium |
1,133 |
514 |
474 |
1 |
7 |
6 |
54 |
1 |
| Rapamycin induced mycelium |
1,120 |
593 |
543 |
1 |
3 |
11 |
68 |
2 |
| All databanks |
51,759 |
6,618 |
5,848 |
5 |
80 |
167 |
668 |
36 |
|
*Cluster covering a CDS. | ||||||||
Espagne et al. Genome Biology 2008 9:R77 doi:10.1186/gb-2008-9-5-r77 |
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